HHsearch alignment for GI: 254780943 and conserved domain: PRK13936

Probab=98.34  E-value=5.5e-06  Score=60.64  Aligned_cols=102  Identities=16%  Similarity=0.193  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEECCCCCCHHH-HHHHHHHHH----CCCCCEEE---------ECCHHHCC-------CCCCCCCCEEEEEC
Q ss_conf             35655103520365430799-999999862----56673143---------04201001-------23344555057752
Q gi|254780943|r  287 FANISGLLVSSCGTSYLAGL-VGKFWFERL----ARLKVEID---------VSSEFRYR-------DFVYSSKWASLFIS  345 (608)
Q Consensus       287 ~~~~~~I~~vGcGTSy~Aal-~~~~~~e~~----~~i~v~v~---------~asEf~y~-------~~~~~~~tlvI~iS  345 (608)
T Consensus        40 ~~~g~ki~~~GNGgSaa~A~h~a~el~~~~~~~r~~lpai~L~~d~~~lTai~ND~g~~~vf~rQl~a~~~~gDili~iS  119 (197)
T PRK13936         40 LLNEGKILACGNGGSAADAQHFSSELLNRFERERPSLPAIALTTDSSTLTAIANDYSYNEVFSKQVRALGQPGDVLLAIS  119 (197)
T ss_pred             HHCCCEEEEEECCHHHHHHHHHHHHHHCHHHCCCCCCCEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             98799899996878999999999998665412788875576436740110102787899999999998389999899996


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC---CCCCCCC
Q ss_conf             678818999999998630244246511787631000---2410136
Q gi|254780943|r  346 QSGETADTLASLRYMRTQGLTIGSLVNVLESTIARE---SDFIFPI  388 (608)
Q Consensus       346 QSGeT~dti~Al~~ak~~g~~tiaItN~~~S~la~~---aD~~i~~  388 (608)
T Consensus       120 ~SGnS~Nii~A~~~A~~~g~~~i~ltG~dgg~l~~l~~~~Di~i~v  165 (197)
T PRK13936        120 TSGNSANVIQAIQAAHEREMHVVALTGRDGGKMASLLLPEDVEIRV  165 (197)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEC
T ss_conf             9999989999999999859959999816853567525668989981