HHsearch alignment for GI: 254780943 and conserved domain: TIGR01134
>TIGR01134 purF amidophosphoribosyltransferase; InterPro: IPR005854 Purine nucleotides are synthesised both via the de novo pathway and via the salvage pathway and are vital for cell functions and cell proliferation through DNA and RNA syntheses and ATP energy supply. Amidophosphoribosyltransferase (2.4.2.14 from EC) is the rate-limiting enzyme in the de novo pathway of purine ribonucleotide synthesis and is regulated by feedback inhibition by AMP and GMP . 5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = L-glutamine + 5-phospho-alpha-D-ribose 1-diphosphate + H2O This family contains sequences which are members of the MEROPS peptidase family C44 (glutamine phosphoribosylpyrophosphate amidotransferase precursor, clan PB(C)) and sequences which are classed as non-peptidase homologs. These are sequences either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004044 amidophosphoribosyltransferase activity, 0009113 purine base biosynthetic process.
Probab=100.00 E-value=0 Score=364.03 Aligned_cols=215 Identities=28% Similarity=0.500 Sum_probs=194.2
Q ss_pred CEEEEEECCCHHH--HHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCC
Q ss_conf 6699997250127--99999999763158743489999589299994586589988752103478654465104543889
Q gi|254780943|r 2 CGIVGIVGRESVG--ERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKKPLKGNIGIAHTRWATHGL 79 (608)
Q Consensus 2 CGI~G~~~~~~~~--~~l~~~L~~Le~RG~Ds~Gia~~~~~~i~~~K~~g~i~~l~~~~~~~~~~~~~gIgHtR~AT~G~ 79 (608)
T Consensus 1 CGV~G~~~~~~~~~~~~~YygL~aLQHRGQEsAG~~~~dg~~~~~~~~~GLV~dVF~~~~l~~L~G~~~~GHVRYSTaGs 80 (467)
T TIGR01134 1 CGVFGVVSQEEVAGAELTYYGLYALQHRGQESAGVTVSDGNKTRLHKGNGLVSDVFNEETLARLKGNVGAGHVRYSTAGS 80 (467)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCEEHCCCCHHHHHHHCCCEEEEEECCCCCCC
T ss_conf 94785246600125557889987432104051147973697899996185002005802488634660345533732488
Q ss_pred CCC-CCCCCEEE----CCEEEEECCEECCHHHHHHHHHHCC--CEEEECCCHHHHHHHHHHHHH------H-CCHHHHHH
Q ss_conf 970-02675023----8899997681506899989999789--889724761567888763432------0-01026779
Q gi|254780943|r 80 PNK-ENSHPHCI----EGIAVTHNGIIENFSRLKKEHFSSQ--QVFLTETDTEVIACLLEKFIK------N-GSSKKETM 145 (608)
Q Consensus 80 ~~~-~NahP~~~----~~~~vvHNG~I~N~~elr~~l~~~g--~~f~s~tDsEvi~~li~~~~~------~-~~~~~~ai 145 (608)
T Consensus 81 s~~~~naQPf~v~~~~Gg~~lAHNGNLvN~~eLr~~l~~~G~~~~F~t~~DsEV~~~l~~~e~~~~~~l~~~~~~~~~~~ 160 (467)
T TIGR01134 81 SGSSENAQPFVVSSPYGGLALAHNGNLVNADELRRELEEEGDRRHFNTTSDSEVLLNLLAHELDVQNKLESDKDDLFDAV 160 (467)
T ss_pred CCCCCCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 87432224556522677656898787212599999998379844256487089999999613731113464314789999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEE--CC-CCEEEECCCCC---EEEECCCCCCCCCCCE-EEECCCCEEEEEECCC
Q ss_conf 9999988751222010046872389997--49-96077608961---3661376201111103-7982765188973057
Q gi|254780943|r 146 QKLMQCLTGSYSIAVIFEDDPHSIIVAR--KG-PPLIIGHGEGE---MFVGSDVTALTLLTDK-VTYMEDGDWAIIRNSG 218 (608)
Q Consensus 146 ~~~~~~l~G~ya~~il~~~~p~~i~~ar--~g-sPL~iG~~~~~---~~vaSd~~al~~~t~~-~~~L~dgei~~i~~~~ 218 (608)
T Consensus 161 ~~~~~~~~GAY~lv~m~~---~~l~a~RDP~G~RPLvlG~~~~g~~~y~vASE~cAld~~g~~~~RDV~PGE~v~~~~~g 237 (467)
T TIGR01134 161 AEVLERVRGAYALVAMGE---DGLVAVRDPHGVRPLVLGRLGDGGTEYVVASESCALDVLGAEFVRDVEPGEVVVTFDGG 237 (467)
T ss_pred HHHHHHCCCEEEEEEEEC---CEEEEEECCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEECCCCEEEEECCCC
T ss_conf 999854474379999727---70799988867676100213578410378850278642041003304883599981895
Q ss_pred C
Q ss_conf 4
Q gi|254780943|r 219 L 219 (608)
Q Consensus 219 ~ 219 (608)
T Consensus 238 ~ 238 (467)
T TIGR01134 238 K 238 (467)
T ss_pred E
T ss_conf 5