HHsearch alignment for GI: 254780943 and conserved domain: TIGR03108
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=99.97 E-value=7.4e-31 Score=233.61 Aligned_cols=178 Identities=29% Similarity=0.410 Sum_probs=143.8
Q ss_pred CCEEEEEECCC---HH-HHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf 96699997250---12-799999999763158743489999589299994586589988752103478654465104543
Q gi|254780943|r 1 MCGIVGIVGRE---SV-GERLFKALKRLEYRGYDSSGMATICDGKIQCVRAQGKLSELEKELNKKPLKGNIGIAHTRWAT 76 (608)
Q Consensus 1 MCGI~G~~~~~---~~-~~~l~~~L~~Le~RG~Ds~Gia~~~~~~i~~~K~~g~i~~l~~~~~~~~~~~~~gIgHtR~AT 76 (608)
T Consensus 1 MCGI~G~~~~~~~~~~~~~~l~~m~~~~~hRGPD~~g~~~~---------------------------~~v~lgh~RLsI 53 (628)
T TIGR03108 1 MCGITGIFDLTGQRPIDRDLLRRMNDAQAHRGPDGGGVHVE---------------------------PGIGLGHRRLSI 53 (628)
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEC---------------------------CCEEEEECCEEE
T ss_conf 98279998578888537999999997466879998884865---------------------------998998233001
Q ss_pred CCCCCCCCCCCEEE--CCEEEEECCEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 88997002675023--8899997681506899989999789889724761567888763432001026779999998875
Q gi|254780943|r 77 HGLPNKENSHPHCI--EGIAVTHNGIIENFSRLKKEHFSSQQVFLTETDTEVIACLLEKFIKNGSSKKETMQKLMQCLTG 154 (608)
Q Consensus 77 ~G~~~~~NahP~~~--~~~~vvHNG~I~N~~elr~~l~~~g~~f~s~tDsEvi~~li~~~~~~~~~~~~ai~~~~~~l~G 154 (608)
T Consensus 54 iDl-~-~g~QP~~~~~~~~~ivfNGEIYN~~eLr~~L~~~g~~f~t~sDtEVll~~y~~---~G~-------~~~~~l~G 121 (628)
T TIGR03108 54 IDL-S-GGQQPLFNEDGSVVVVFNGEIYNFQELVAELQALGHVFRTRSDTEVIVHAWEE---WGE-------ACVERFRG 121 (628)
T ss_pred ECC-C-CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH---HHH-------HHHHHHCE
T ss_conf 079-8-89999775999989999614028999999998569961789819999999999---859-------99988457
Q ss_pred HHHHHHHCCCCCCEEEEEEC--C-CCEEEECCCC-CEEEECCCCCCCCCC---------------------------CEE
Q ss_conf 12220100468723899974--9-9607760896-136613762011111---------------------------037
Q gi|254780943|r 155 SYSIAVIFEDDPHSIIVARK--G-PPLIIGHGEG-EMFVGSDVTALTLLT---------------------------DKV 203 (608)
Q Consensus 155 ~ya~~il~~~~p~~i~~ar~--g-sPL~iG~~~~-~~~vaSd~~al~~~t---------------------------~~~ 203 (608)
T Consensus 122 mFAfai~D~~~-~~l~laRDr~GiKPLYY~~~~~g~~~FaSEikall~~~~~~~~id~~~l~~yl~~~~~~~~~T~f~~I 200 (628)
T TIGR03108 122 MFAFALWDRNQ-ETLFLARDRLGIKPLYYALLADGWFIFGSELKALTAHPSLPRELDPLAVEDYFAYGYVPDPRTIFKGV 200 (628)
T ss_pred EEEEEEECCCC-CEEEEECCCCCCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88999983777-78999868666753068981896299810046887378876311599999999737889986401574
Q ss_pred EECCCCEEEEEECCC
Q ss_conf 982765188973057
Q gi|254780943|r 204 TYMEDGDWAIIRNSG 218 (608)
Q Consensus 204 ~~L~dgei~~i~~~~ 218 (608)
T Consensus 201 ~~l~PG~~l~~~~~~ 215 (628)
T TIGR03108 201 KKLEPGHTLTLRRGA 215 (628)
T ss_pred EECCCCCEEEEECCC
T ss_conf 131897079998898