HHsearch alignment for GI: 254780943 and conserved domain: cd01907
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=100.00 E-value=0 Score=373.33 Aligned_cols=210 Identities=30% Similarity=0.405 Sum_probs=185.4
Q ss_pred CEEEEEECCC---HHHHHHHHHHHHHHCCCC-CEEEEEEEECC---------EEEEEECCCCHHHHHHHHCCCCCCCCEE
Q ss_conf 6699997250---127999999997631587-43489999589---------2999945865899887521034786544
Q gi|254780943|r 2 CGIVGIVGRE---SVGERLFKALKRLEYRGY-DSSGMATICDG---------KIQCVRAQGKLSELEKELNKKPLKGNIG 68 (608)
Q Consensus 2 CGI~G~~~~~---~~~~~l~~~L~~Le~RG~-Ds~Gia~~~~~---------~i~~~K~~g~i~~l~~~~~~~~~~~~~g 68 (608)
T Consensus 1 CGI~Gi~~~~~~~~~~~~~~~~L~~LqhRGq~dsaGia~~~~~~~~~~~~g~~~~~~K~~G~v~~v~~~~~l~~~~g~~~ 80 (249)
T cd01907 1 CGIFGIMSKDGEPFVGALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARRYDLEEYKGYHW 80 (249)
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEECCCCEEEEECCCCHHHHHHHHCCCCCCCCEE
T ss_conf 97999985898754899999999997078971425799984898458634760478853788999986644002676367
Q ss_pred EEEECCCCCCCCCCCCCCCEEECCEEEEECCEECCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHHH----
Q ss_conf 6510454388997002675023889999768150689998999978988972476156788876343200102677----
Q gi|254780943|r 69 IAHTRWATHGLPNKENSHPHCIEGIAVTHNGIIENFSRLKKEHFSSQQVFLTETDTEVIACLLEKFIKNGSSKKET---- 144 (608)
Q Consensus 69 IgHtR~AT~G~~~~~NahP~~~~~~~vvHNG~I~N~~elr~~l~~~g~~f~s~tDsEvi~~li~~~~~~~~~~~~a---- 144 (608)
T Consensus 81 IGH~RysT~g~~~~~~aqPf~~~~~~lvhNG~i~N~~~lr~~l~~~g~~f~s~sDsEvi~~li~~~~~~~~~~~~~~~~~ 160 (249)
T cd01907 81 IAHTRQPTNSAVWWYGAHPFSIGDIAVVHNGEISNYGSNREYLERFGYKFETETDTEVIAYYLDLLLRKGGLPLEYYKHI 160 (249)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 63050356899864577774059886881541316999999999769972328808999999999987379837899986
Q ss_pred ---------------HHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--C-CCEEEECCCCCEEEECCCCCCCC----CCCE
Q ss_conf ---------------999999887512220100468723899974--9-96077608961366137620111----1103
Q gi|254780943|r 145 ---------------MQKLMQCLTGSYSIAVIFEDDPHSIIVARK--G-PPLIIGHGEGEMFVGSDVTALTL----LTDK 202 (608)
Q Consensus 145 ---------------i~~~~~~l~G~ya~~il~~~~p~~i~~ar~--g-sPL~iG~~~~~~~vaSd~~al~~----~t~~ 202 (608)
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~ldG~yal~i~~~---~~l~~~RD~~GiRPL~~g~~~~~~~vASEs~Al~~i~~~~~~~ 237 (249)
T cd01907 161 IRMPEEERELLLALRLTYRLADLDGPFTIIVGTP---DGFIVIRDRIKLRPAVVAETDDYVAIASEECAIREIPDRDNAK 237 (249)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEC---CEEEEEEECCCCCCEEEEEECCEEEEEECHHHHHHCCCCCCCE
T ss_conf 4111111200189999988861577559999989---9469998148999869998499999996599998604857336
Q ss_pred EEECCCCEEEEE
Q ss_conf 798276518897
Q gi|254780943|r 203 VTYMEDGDWAII 214 (608)
Q Consensus 203 ~~~L~dgei~~i 214 (608)
T Consensus 238 v~e~~pGE~vv~ 249 (249)
T cd01907 238 VWEPRPGEYVIW 249 (249)
T ss_pred EECCCCCEEEEC
T ss_conf 833789868969