HHsearch alignment for GI: 254780943 and conserved domain: cd05006
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=98.63 E-value=1.3e-07 Score=72.03 Aligned_cols=101 Identities=16% Similarity=0.198 Sum_probs=72.8
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHCC--------CCCEEEE--C-------CHHHC-------CCCCCCCCCEEE
Q ss_conf 3565510352036543079999999986256--------6731430--4-------20100-------123344555057
Q gi|254780943|r 287 FANISGLLVSSCGTSYLAGLVGKFWFERLAR--------LKVEIDV--S-------SEFRY-------RDFVYSSKWASL 342 (608)
Q Consensus 287 ~~~~~~I~~vGcGTSy~Aal~~~~~~e~~~~--------i~v~v~~--a-------sEf~y-------~~~~~~~~tlvI 342 (608)
T Consensus 30 ~~~g~kI~~~GNGgSa---~~A~H~a~dl~~~~~~~r~~l~aisL~~~~~~~ta~~ND~~~~~if~~ql~~~~~~gDili 106 (177)
T cd05006 30 LLNGGKILICGNGGSA---ADAQHFAAELVKRFEKERPGLPAIALTTDTSILTAIANDYGYEEVFSRQVEALGQPGDVLI 106 (177)
T ss_pred HHCCCEEEEEECCHHH---HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEE
T ss_conf 9879989999687408---8899999987357666888701797678778888875653299999999997446898899
Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 752678818999999998630244246511787631000241013674
Q gi|254780943|r 343 FISQSGETADTLASLRYMRTQGLTIGSLVNVLESTIARESDFIFPIKA 390 (608)
Q Consensus 343 ~iSQSGeT~dti~Al~~ak~~g~~tiaItN~~~S~la~~aD~~i~~~a 390 (608)
T Consensus 107 ~iS~sG~s~nii~a~~~ak~~g~~~i~ltg~~gg~l~~~~D~~i~vps 154 (177)
T cd05006 107 GISTSGNSPNVLKALEAAKERGMKTIALTGRDGGKLLELADIEIHVPS 154 (177)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEEECC
T ss_conf 981899998999999999987998999987898616761998999699