HHsearch alignment for GI: 254780943 and conserved domain: cd05006
>cd05006 SIS_GmhA Phosphoheptose isomerase is a member of the SIS (Sugar ISomerase) superfamily. Phosphoheptose isomerase catalyzes the isomerization of sedoheptulose 7-phosphate into D-glycero-D-mannoheptose 7-phosphate. This is the first step of the biosynthesis of gram-negative bacteria inner core lipopolysaccharide precursor, L-glycero-D-mannoheptose (Gmh).
Probab=96.67 E-value=0.06 Score=32.58 Aligned_cols=119 Identities=22% Similarity=0.171 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHH--------------------CCCCCHHH
Q ss_conf 6774467798742036145521366449999999999997422114423243--------------------14463788
Q gi|254780943|r 449 IYSQIEKLCCGLAKCQTLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGE--------------------LKHGPIAL 508 (608)
Q Consensus 449 ~~~~i~~~a~~~~~~~~~~~lG~G~~y~~A~EgALKlkE~syihaeg~~agE--------------------~kHGP~al 508 (608)
T Consensus 19 i~~~~~~i~~~~~~g~kI~~~GNGgSa~~A~H~a~dl~~~~~~~r~~l~aisL~~~~~~~ta~~ND~~~~~if~~ql~~~ 98 (177)
T cd05006 19 IEQAAQLLAEALLNGGKILICGNGGSAADAQHFAAELVKRFEKERPGLPAIALTTDTSILTAIANDYGYEEVFSRQVEAL 98 (177)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999999999987998999968740888999999873576668887017976787788888756532999999999974
Q ss_pred HCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCH
Q ss_conf 0798718999448014688999999998279808999565321000134662798688781
Q gi|254780943|r 509 ITEGTFVIAIAPYDRFFQKTLSNIQEIVTRGGRVIFITDEEGLKRQDFPSIETIVLPSMGE 569 (608)
Q Consensus 509 i~~~~~vi~i~~~~~~~~k~~s~~~Ei~arg~~vi~I~~~~~~~~~~~~~~~~i~iP~~~~ 569 (608)
T Consensus 99 ~~~gDili~iS~sG~s~-nii~a~~~ak~~g~~~i~ltg~~gg~l~~~~-D~~i~vps~~~ 157 (177)
T cd05006 99 GQPGDVLIGISTSGNSP-NVLKALEAAKERGMKTIALTGRDGGKLLELA-DIEIHVPSDDT 157 (177)
T ss_pred CCCCCEEEEECCCCCCH-HHHHHHHHHHHCCCEEEEEECCCCCHHHHHC-CEEEEECCCCC
T ss_conf 46898899981899998-9999999999879989999878986167619-98999699985