HHsearch alignment for GI: 254780943 and conserved domain: cd05008
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=98.28 E-value=8.2e-06 Score=59.45 Aligned_cols=120 Identities=25% Similarity=0.276 Sum_probs=88.9
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 14552136644999999999999742211442324314463788079871899944801468899999999827980899
Q gi|254780943|r 465 TLLYVGRGSSYPLALEGALKIKEISYLHAEGYAAGELKHGPIALITEGTFVIAIAPYDRFFQKTLSNIQEIVTRGGRVIF 544 (608)
Q Consensus 465 ~~~~lG~G~~y~~A~EgALKlkE~syihaeg~~agE~kHGP~ali~~~~~vi~i~~~~~~~~k~~s~~~Ei~arg~~vi~ 544 (608)
T Consensus 1 rI~~~G~GsS~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvI~iS~SG~t~e-~i~a~~~a~~~g~~~i~ 78 (126)
T cd05008 1 RILIVGCGTSYHAALVAKYLLERLAGIPVEVEAASEFRYRRP-LLDEDTLVIAISQSGETAD-TLAALRLAKEKGAKTVA 78 (126)
T ss_pred CEEEEEECHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCC-CCCCCCEEEEECCCCCCCC-HHHHHHHHHHCCCCEEE
T ss_conf 999999617999999999999997299889986067554478-8999859999868979800-78899999982994898
Q ss_pred EECCCCCCCCCCCCCCEEECCCCCHHH-----HHHHHHHHHHHHHHHH
Q ss_conf 956532100013466279868878156-----6589999999999999
Q gi|254780943|r 545 ITDEEGLKRQDFPSIETIVLPSMGEIV-----SPIVFSLPIQMIAYCT 587 (608)
Q Consensus 545 I~~~~~~~~~~~~~~~~i~iP~~~~~l-----~pl~~~iplQllAy~~ 587 (608)
T Consensus 79 iT~~~~S~la~~ad-~~i~~~~g~E~~~~~Tks~t~~~~~l~lla~~~ 125 (126)
T cd05008 79 ITNVVGSTLAREAD-YVLYLRAGPEISVAATKAFTSQLLALLLLALAL 125 (126)
T ss_pred EECCCCCHHHHHCC-EEEECCCCCEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 70699997899689-879869877678708699999999999999986