HHsearch alignment for GI: 254780945 and conserved domain: COG0513
>COG0513 SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].
Probab=96.17 E-value=0.035 Score=36.68 Aligned_cols=72 Identities=18% Similarity=0.391 Sum_probs=62.4
Q ss_pred CEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEE
Q ss_conf 45886127999999998621101457865899624642256676877621347548641112013345544441788
Q gi|254780945|r 323 QAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVI 399 (700)
Q Consensus 323 Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvV 399 (700)
T Consensus 275 ~~IVF~~tk~~~~~----l~~~l~~~g~~~~~lhG~l~q~~R~~~l~~F~~g~~~iLVaTDv-aaRGiDi~~v~~Vi 346 (513)
T COG0513 275 RVIVFVRTKRLVEE----LAESLRKRGFKVAALHGDLPQEERDRALEKFKDGELRVLVATDV-AARGLDIPDVSHVI 346 (513)
T ss_pred EEEEEECCHHHHHH----HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECH-HHCCCCCCCCCEEE
T ss_conf 39999576776999----99999978965999738899889999999997599898998065-44689966674799