HHsearch alignment for GI: 254780945 and conserved domain: KOG0329
>KOG0329 consensus.
Probab=98.20 E-value=1.7e-05 Score=62.75 Aligned_cols=282 Identities=23% Similarity=0.355 Sum_probs=165.1
Q ss_pred CCC-CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH---HHCCEEEEEHHHHHHHHH---HHHHH
Q ss_conf 246-79889999999998410013430788621442236999999733444---305458861279999999---98621
Q gi|254780945|r 270 PFS-PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE---AGGQAVIMAPIGILAQQH---YEFIK 342 (700)
Q Consensus 270 PF~-LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~---~G~Q~alMaPTEILA~QH---~~~~~ 342 (700)
T Consensus 61 gfehpsevqhecipq------ailgmdvlcqaksgmgktavfvl~tlqqiepv~g~vsvlvmchtrelafqi~~ey~rfs 134 (387)
T KOG0329 61 GFEHPSEVQHECIPQ------AILGMDVLCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFS 134 (387)
T ss_pred CCCCCHHHHHHHHHH------HHHCCHHHEECCCCCCCEEEEEHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 578916764420047------76341120100257884365522235523788980799999621899999889999997
Q ss_pred HHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC----HHHCC-CCCCCCCCCEEEECCCCCCCHHHHHHHHHC
Q ss_conf 1014578658996246422566768776213475486411----12013-345544441788521013356889987402
Q gi|254780945|r 343 KYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT----HALFQ-DSIQYYKLILVIVDEQHRFGVQQRLKLTQK 417 (700)
Q Consensus 343 ~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGT----HAL~q-~~v~F~~LgLvViDEQHRFGV~QR~~L~~K 417 (700)
T Consensus 135 kymP~--vkvaVFfGG~~Ikkdee~lk~----~PhivVgTPGrilALvr~k~l~lk~vkhFvlDEcdkml-e~-lDMrRD 206 (387)
T KOG0329 135 KYMPS--VKVSVFFGGLFIKKDEELLKN----CPHIVVGTPGRILALVRNRSLNLKNVKHFVLDECDKML-EQ-LDMRRD 206 (387)
T ss_pred HHCCC--CEEEEEECCEECCCCHHHHHC----CCEEEECCCHHHHHHHHHCCCCHHHCCEEEHHHHHHHH-HH-HHHHHH
T ss_conf 54888--458999755310346998827----99089768288999987245753203211233377899-98-788887
Q ss_pred -----CCCCC---CEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf -----56776---1010101322789999752010111102355766620799970200268999976310387389997
Q gi|254780945|r 418 -----ATAPH---VLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWIC 489 (700)
Q Consensus 418 -----g~~ph---~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l~~g~q~y~Vc 489 (700)
T Consensus 207 vQEifr~tp~~KQvmmfsatl------------------------skeiRpv---------C~kFmQdP----mEi~v-- 247 (387)
T KOG0329 207 VQEIFRMTPHEKQVMMFSATL------------------------SKEIRPV---------CHKFMQDP----MEIFV-- 247 (387)
T ss_pred HHHHHHCCCCCCEEEEEEEEC------------------------CHHHHHH---------HHHHHCCC----HHHHC--
T ss_conf 999863286532034542013------------------------1566788---------77552181----66502--
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHC-------------CCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCC
Q ss_conf 1201221112101466666668663-------------710312014699899999999975598699998003410468
Q gi|254780945|r 490 PQIEEKKESNFRSVVERFNSLHEHF-------------TSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGID 556 (700)
Q Consensus 490 PlIeese~~~~~~~~~~~~~l~~~~-------------~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvd 556 (700)
T Consensus 248 ---DdE~KLtLHGLqQ~YvkLke~eKNrkl~dLLd~LeFNQVvIF---vKsv~R---l-~f~---kr-~vat~lfgrgmd 313 (387)
T KOG0329 248 ---DDEAKLTLHGLQQYYVKLKENEKNRKLNDLLDVLEFNQVVIF---VKSVQR---L-SFQ---KR-LVATDLFGRGMD 313 (387)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE---EEHHHH---H-HHH---HH-HHHHHHHCCCCC
T ss_conf ---415655333477877766555543566656545441204676---203445---5-566---66-677664046667
Q ss_pred CCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 887658998585254746887730116678983599997088899879999999984142589999998
Q gi|254780945|r 557 VVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEEDL 625 (700)
Q Consensus 557 vpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~dGf~iAe~Dl 625 (700)
T Consensus 314 iervNi~~NYdmp~~~DtYlHrv-~rAgrfGtkglaitfvs~e------~da~iLn~vqdRf~v~i~eL 375 (387)
T KOG0329 314 IERVNIVFNYDMPEDSDTYLHRV-ARAGRFGTKGLAITFVSDE------NDAKILNPVQDRFEVNIKEL 375 (387)
T ss_pred CCCCEEEECCCCCCCCHHHHHHH-HHHHCCCCCCCEEEHHCCH------HHHHHHCHHHHHHHCCHHHC
T ss_conf 33220232268988712788876-2430356555201000111------26777431667655008656