HHsearch alignment for GI: 254780945 and conserved domain: KOG0334
>KOG0334 consensus.
Probab=99.59 E-value=1.2e-11 Score=110.96 Aligned_cols=372 Identities=23% Similarity=0.322 Sum_probs=228.6
Q ss_pred HHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH--------HHCCEEEEEHH
Q ss_conf 789999863024-679889999999998410013430788621442236999999733444--------30545886127
Q gi|254780945|r 260 KIAQKILRNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE--------AGGQAVIMAPI 330 (700)
Q Consensus 260 ~~~~~f~~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~--------~G~Q~alMaPT 330 (700)
T Consensus 375 ~il~-tlkkl~y~k~~~IQ~qAiP~Ims----Grd--vIgvakTgSGKT~af~LPmirhi~dQr~~~~gdGPi~li~aPt 447 (997)
T KOG0334 375 KILE-TLKKLGYEKPTPIQAQAIPAIMS----GRD--VIGVAKTGSGKTLAFLLPMIRHIKDQRPLEEGDGPIALILAPT 447 (997)
T ss_pred HHHH-HHHHHCCCCCCCHHHHHCCHHCC----CCC--EEEEECCCCCCCHHHHHHHHHHHCCCCCHHCCCCCEEEEECCC
T ss_conf 8999-99970689987556643012225----774--5877326886203442115554204797110788647997377
Q ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCC-----CCCCCCCCC---EEEECC
Q ss_conf 999999998621101457865899624642256676877621347548641112013-----345544441---788521
Q gi|254780945|r 331 GILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQ-----DSIQYYKLI---LVIVDE 402 (700)
Q Consensus 331 EILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q-----~~v~F~~Lg---LvViDE 402 (700)
T Consensus 448 rela~QI~r~~~kf~k~l~ir~v~vygg~---~~~~qiaelkRg-~eIvV~tpGRmiD~l~~n~grvtnlrR~t~lv~de 523 (997)
T KOG0334 448 RELAMQIHREVRKFLKLLGIRVVCVYGGS---GISQQIAELKRG-AEIVVCTPGRMIDILCANSGRVTNLRRVTYLVLDE 523 (997)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCC---CHHHHHHHHHCC-CCEEEECCCHHHHHHHHCCCCCCCCCCCCEEEECH
T ss_conf 78999999999998774176279842785---188789998678-96599645032336661577623310110355411
Q ss_pred CCCCCHHHHHHHHHCCCCC-----------C-CEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEE------
Q ss_conf 0133568899874025677-----------6-101010132278999975201011110235576662079997------
Q gi|254780945|r 403 QHRFGVQQRLKLTQKATAP-----------H-VLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIP------ 464 (700)
Q Consensus 403 QHRFGV~QR~~L~~Kg~~p-----------h-~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~------ 464 (700)
T Consensus 524 aDr------mf--dmgfePq~~~Ii~nlrpdrQtvlfSatfpr~m~~--l---a~~vl~------~Pve-iiv~~~svV~ 583 (997)
T KOG0334 524 ADR------MF--DMGFEPQITRILQNLRPDRQTVLFSATFPRSMEA--L---ARKVLK------KPVE-IIVGGRSVVC 583 (997)
T ss_pred HHH------HH--HCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHH--H---HHHHHC------CCEE-EEECCCEEEE
T ss_conf 235------44--0045754040976466035434566220699999--9---988615------8808-9974630574
Q ss_pred -------------CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHH
Q ss_conf -------------0200268999976310387389997120122111210146666666866371031201469989999
Q gi|254780945|r 465 -------------INRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKE 531 (700)
Q Consensus 465 -------------~~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~ 531 (700)
T Consensus 584 k~V~q~v~V~~~e~eKf~kL~eLl~e~~e~~~tiiFv-~---~q-----e~~d~l~~~L~~-ag~~~~slHGgv~q~dR~ 653 (997)
T KOG0334 584 KEVTQVVRVCAIENEKFLKLLELLGERYEDGKTIIFV-D---KQ-----EKADALLRDLQK-AGYNCDSLHGGVDQHDRS 653 (997)
T ss_pred CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEE-C---CC-----HHHHHHHHHHHH-CCCCHHHHCCCCCHHHHH
T ss_conf 2404899981483677999999999886248879998-4---71-----478899999985-686054305787567788
Q ss_pred HHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 99999755986999980034104688876589985852547468877301166789835999970888998799999999
Q gi|254780945|r 532 SVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVL 611 (700)
Q Consensus 532 ~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l 611 (700)
T Consensus 654 sti~dfK~~~~~LLvaTsvvarGLdv~~l~Lvvnyd~pn-h~edyvhR~gRTgragrkg~AvtFi~p~q~~~a~dl~~al 732 (997)
T KOG0334 654 STIEDFKNGVVNLLVATSVVARGLDVKELILVVNYDFPN-HYEDYVHRVGRTGRAGRKGAAVTFITPDQLKYAGDLCKAL 732 (997)
T ss_pred HHHHHHHCCCCEEEEEHHHHHCCCCCCCEEEEEECCCCH-HHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH
T ss_conf 589997456742898514542676665405899736631-2799999851356677763379985778864378899999
Q ss_pred HHHC--HH---HHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 8414--25---899999985206300026000698744000388759999999999999998484636655
Q gi|254780945|r 612 KNTE--DG---FLIAEEDLKQRKEGEILGIKQSGMPKFLIAQPELHDSLLEIARKDAKHILTQDPDLTSVR 677 (700)
Q Consensus 612 ~~~~--dG---f~iAe~Dl~lRG~G~~~G~~QsG~~~~~~~d~~~d~~ll~~a~~~a~~~~~~d~~l~~~~ 677 (700)
T Consensus 733 ~~~~~~~P~~l~~l~~~f~~~~~~~-~s~~~~~G--g~~G~g~~~~-~~~~~~~~~~ke~q~~~~g~~~~d 799 (997)
T KOG0334 733 ELSKQPVPKLLQALSERFKAKQKAG-GSQVHGGG--GFGGKGLKFD-EVEEELRQERKEAQRKDLGLKEGD 799 (997)
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCC--CCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 8615899567899999988652300-45466667--5467766631-789999988862244567877677