HHsearch alignment for GI: 254780945 and conserved domain: KOG0335
>KOG0335 consensus.
Probab=99.74 E-value=8.6e-15 Score=135.59 Aligned_cols=330 Identities=20% Similarity=0.268 Sum_probs=239.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH-------------HCCEEEEEHHHHHHHHHH
Q ss_conf 6798899999999984100134307886214422369999997334443-------------054588612799999999
Q gi|254780945|r 272 SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEA-------------GGQAVIMAPIGILAQQHY 338 (700)
Q Consensus 272 ~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~-------------G~Q~alMaPTEILA~QH~ 338 (700)
T Consensus 96 ~ptpvQk~sip~i~~Grdl------macAqTGsGKT~aFLiPii~~~~~~~~~~~~~~~~~~~P~~lIlapTReL~~Qi~ 169 (482)
T KOG0335 96 KPTPVQKYSIPIISGGRDL------MACAQTGSGKTAAFLIPIISYLLDEGPEDRGESGGGVYPRALILAPTRELVDQIY 169 (482)
T ss_pred CCCCCEECCCCEEECCCCE------EEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHH
T ss_conf 8986156042244258842------7882578851378888899999864865666567788972599817378766788
Q ss_pred HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC----HHHC-CCCCCCCCCCEEEECCCCC------CC
Q ss_conf 86211014578658996246422566768776213475486411----1201-3345544441788521013------35
Q gi|254780945|r 339 EFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT----HALF-QDSIQYYKLILVIVDEQHR------FG 407 (700)
Q Consensus 339 ~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGT----HAL~-q~~v~F~~LgLvViDEQHR------FG 407 (700)
T Consensus 170 nea~k~~~~s~~~~~~~ygg~~~~---~q~~~~~~g-cdIlvaTpGrL~d~~e~g~i~l~~~k~~vLDEADrMlD~mgF~ 245 (482)
T KOG0335 170 NEARKFSYLSGMKSVVVYGGTDLG---AQLRFIKRG-CDILVATPGRLKDLIERGKISLDNCKFLVLDEADRMLDEMGFE 245 (482)
T ss_pred HHHHHHCCCCCCEEEEEECCCCHH---HHHHHHCCC-CCEEEECCCHHHHHHHCCEEEHHHCCEEEECCHHHHHHHCCCC
T ss_conf 888764022122033005784454---422333257-5578855750564554151126238589952367766632666
Q ss_pred HHHHHHHHHCCC----CCCCEEECHH---HHHHHHHHHHHH---CCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH
Q ss_conf 688998740256----7761010101---322789999752---010111102355766620799970200268999976
Q gi|254780945|r 408 VQQRLKLTQKAT----APHVLLMTAT---PIPRTLVLTSLG---DIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKV 477 (700)
Q Consensus 408 V~QR~~L~~Kg~----~ph~L~MtAT---PIPRTLal~~yg---dldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~ 477 (700)
T Consensus 246 p~Ir~Iv~~~~~~~~~~~qt~mFSAtfp~~iq~l~~~fl~~~yi~laV~rvg~~~~ni~q~i~~V~~~~kr~~Lldll~~ 325 (482)
T KOG0335 246 PQIRKIVEQLGMPPKNNRQTLLFSATFPKEIQRLAADFLKDNYIFLAVGRVGSTSENITQKILFVNEMEKRSKLLDLLNK 325 (482)
T ss_pred HHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHC
T ss_conf 20799962558887466137887355775666447887641513888753046665634676642111357899988613
Q ss_pred HHCC--CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCC
Q ss_conf 3103--87389997120122111210146666666866371031201469989999999997559869999800341046
Q gi|254780945|r 478 VLSE--GKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGI 555 (700)
Q Consensus 478 ~l~~--g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGv 555 (700)
T Consensus 326 ~~~~~~~~~~~~e~tlvFvEt~---~~~d~l~~~l~~~-~~~~~sIhg~~tq~er~~al~~Fr~g~~pvlVaT~VaaRGl 401 (482)
T KOG0335 326 DDGPPSDGEPKWEKTLVFVETK---RGADELAAFLSSN-GYPAKSIHGDRTQIEREQALNDFRNGKAPVLVATNVAARGL 401 (482)
T ss_pred CCCCCCCCCCCCCEEEEEEECC---HHHHHHHHHHHCC-CCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCC
T ss_conf 4678665776431389996130---0326999998617-98745603325563799998776469866798703665478
Q ss_pred CCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCH
Q ss_conf 8887658998585254746887730116678983599997088899879999999984142
Q gi|254780945|r 556 DVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTED 616 (700)
Q Consensus 556 dvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~d 616 (700)
T Consensus 402 Di~~V~hVInyDmP~d~d~YvHRI-GRTGR~Gn~G~atsf~n~~~~~i~~~L~~~l~ea~q 461 (482)
T KOG0335 402 DIPNVKHVINYDMPADIDDYVHRI-GRTGRVGNGGRATSFFNEKNQNIAKALVEILTEANQ 461 (482)
T ss_pred CCCCCCEEEEEECCCCHHHHHHHC-CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 876874358863675246677741-543557777326887647430068999999998426