HHsearch alignment for GI: 254780945 and conserved domain: KOG0340
>KOG0340 consensus.
Probab=99.43 E-value=4.1e-10 Score=98.94 Aligned_cols=319 Identities=19% Similarity=0.277 Sum_probs=200.6
Q ss_pred HHHHHHHHHCC-CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH---HHHCCEEEEEHHHHHHH
Q ss_conf 78999986302-467988999999999841001343078862144223699999973344---43054588612799999
Q gi|254780945|r 260 KIAQKILRNIP-FSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV---EAGGQAVIMAPIGILAQ 335 (700)
Q Consensus 260 ~~~~~f~~~LP-F~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~---~~G~Q~alMaPTEILA~ 335 (700)
T Consensus 16 ~Wlve~l~~l~i~~pTpiQ~~cIpkILeGrd------cig~AkTGsGKT~AFaLPil~rLsedP~giFalvlTPTrELA~ 89 (442)
T KOG0340 16 PWLVEQLKALGIKKPTPIQQACIPKILEGRD------CIGCAKTGSGKTAAFALPILNRLSEDPYGIFALVLTPTRELAL 89 (442)
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC------CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHH
T ss_conf 8999999983588998267652487854663------1031346887411222787776133887606999545288888
Q ss_pred HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHH----CCC-----CCCCCCCCEEEECCCCCC
Q ss_conf 99986211014578658996246422566768776213475486411120----133-----455444417885210133
Q gi|254780945|r 336 QHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHAL----FQD-----SIQYYKLILVIVDEQHRF 406 (700)
Q Consensus 336 QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL----~q~-----~v~F~~LgLvViDEQHRF 406 (700)
T Consensus 90 QiaEQF~alGk~l~lK~~vivGG~d~i~qa~----~L~~rPHvVvatPGRlad~l~sn~~~~~~~~~rlkflVlDEADrv 165 (442)
T KOG0340 90 QIAEQFIALGKLLNLKVSVIVGGTDMIMQAA----ILSDRPHVVVATPGRLADHLSSNLGVCSWIFQRLKFLVLDEADRV 165 (442)
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHH----HCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCEEEEEECCHHHH
T ss_conf 8889999845645632799975688764544----426698757517633354112687655255530046774130265
Q ss_pred CHHHHHHHHHC----CCCC-CCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 56889987402----5677-610101013227899997520101111023557666207999702002689999763103
Q gi|254780945|r 407 GVQQRLKLTQK----ATAP-HVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSE 481 (700)
Q Consensus 407 GV~QR~~L~~K----g~~p-h~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l~~ 481 (700)
T Consensus 166 L~~~f~d~L~~i~e~lP~~RQtLlfSAT-itd~i----------~ql~~~~i-~k~~-a~~~e~~~~vs----tvetL~- 227 (442)
T KOG0340 166 LAGCFPDILEGIEECLPKPRQTLLFSAT-ITDTI----------KQLFGCPI-TKSI-AFELEVIDGVS----TVETLY- 227 (442)
T ss_pred HCCCHHHHHHHHHCCCCCCCCEEEEEEE-HHHHH----------HHHHCCCC-CCCC-CEEEECCCCCC----CHHHHH-
T ss_conf 4156056776665048876433799866-36579----------98636874-5550-26885269987----254552-
Q ss_pred CCEEEEEECCC-----------CCCC--CCC---CCHHHHHHHHHHHHCCC---CEECCCCCCCHHHHHHHHHHHHCCCE
Q ss_conf 87389997120-----------1221--112---10146666666866371---03120146998999999999755986
Q gi|254780945|r 482 GKKAYWICPQI-----------EEKK--ESN---FRSVVERFNSLHEHFTS---SIAIIHGRMSDIDKESVMDSFKNGTC 542 (700)
Q Consensus 482 g~q~y~VcPlI-----------eese--~~~---~~~~~~~~~~l~~~~~~---~v~~lHGkm~~~ek~~~m~~F~~g~~ 542 (700)
T Consensus 228 --q~yI~~~~~vkdaYLv~~Lr~~~~~~~~simIFvnttr~cQ~l~~~l~~le~r~~~lHs~m~Q~eR~~aLsrFrs~~~ 305 (442)
T KOG0340 228 --QGYILVSIDVKDAYLVHLLRDFENKENGSIMIFVNTTRECQLLSMTLKNLEVRVVSLHSQMPQKERLAALSRFRSNAA 305 (442)
T ss_pred --HHEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCEEEEEHHHCCHHHHHHHHHHHHHHCCC
T ss_conf --022205444567889987752221357608999604689999999996303445431100508889989987762674
Q ss_pred EEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 99998003410468887658998585254746887730116678983599997088899879999999984
Q gi|254780945|r 543 KLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKN 613 (700)
Q Consensus 543 ~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~ 613 (700)
T Consensus 306 ~iliaTDVAsRGLDIP~V~LVvN~diPr~P~~yiHR-vGRtARAGR~G~aiSiv----t~rDv~l~~aiE~ 371 (442)
T KOG0340 306 RILIATDVASRGLDIPTVELVVNHDIPRDPKDYIHR-VGRTARAGRKGMAISIV----TQRDVELLQAIEE 371 (442)
T ss_pred CEEEEECHHHCCCCCCCEEEEEECCCCCCHHHHHHH-HCCHHCCCCCCCEEEEE----CHHHHHHHHHHHH
T ss_conf 089973134327898844678706889987888876-03012056776428986----2422799999999