HHsearch alignment for GI: 254780945 and conserved domain: KOG0344
>KOG0344 consensus.
Probab=99.91 E-value=9.9e-25 Score=213.52 Aligned_cols=350 Identities=21% Similarity=0.310 Sum_probs=253.3
Q ss_pred HHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH--------HHHCCEEEEEHHHHHHHHH
Q ss_conf 63024-67988999999999841001343078862144223699999973344--------4305458861279999999
Q gi|254780945|r 267 RNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV--------EAGGQAVIMAPIGILAQQH 337 (700)
Q Consensus 267 ~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~--------~~G~Q~alMaPTEILA~QH 337 (700)
T Consensus 152 ~~~~F~~Pt~iq~~aipvfl~------~r~~lAcapTGsgKtlaf~~Pil~~L~~~~~~~~~~gl~a~Il~ptreLa~Qi 225 (593)
T KOG0344 152 QELGFDEPTPIQKQAIPVFLE------KRDVLACAPTGSGKTLAFNLPILQHLKDLSQEKHKVGLRALILSPTRELAAQI 225 (593)
T ss_pred HHCCCCCCCCCCCHHHHHHHC------CCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHH
T ss_conf 627888877310011566641------33058863578862056556999999875203576542788844449999999
Q ss_pred HHHHHHHC--CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHH----HCCCC---CCCCCCCEEEECCCCC---
Q ss_conf 98621101--457865899624642256676877621347548641112----01334---5544441788521013---
Q gi|254780945|r 338 YEFIKKYT--QNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHA----LFQDS---IQYYKLILVIVDEQHR--- 405 (700)
Q Consensus 338 ~~~~~~~~--~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHA----L~q~~---v~F~~LgLvViDEQHR--- 405 (700)
T Consensus 226 ~re~~k~~~~~~t~~~a~~~~~~~~~~qk~a~~~~---~k~dili~TP~ri~~~~~~~~~~idl~~V~~lV~dEaD~lfe 302 (593)
T KOG0344 226 YREMRKYSIDEGTSLRAAQFSKPAYPSQKPAFLSD---EKYDILISTPMRIVGLLGLGKLNIDLSKVEWLVVDEADLLFE 302 (593)
T ss_pred HHHHHHCCCCCCCCHHHHHCCCCCCHHHCCCHHHH---HHHHHHHCCHHHHHHHHCCCCCCCHHHEEEEEEECHHHHHHC
T ss_conf 99998557777875345516666531103324677---788788618799999855897532012035676646876508
Q ss_pred --CCHHHHHHHHHCCCCCCCEE--ECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEE-----CCCHHHHHHHHH
Q ss_conf --35688998740256776101--010132278999975201011110235576662079997-----020026899997
Q gi|254780945|r 406 --FGVQQRLKLTQKATAPHVLL--MTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIP-----INRIDEVIERLK 476 (700)
Q Consensus 406 --FGV~QR~~L~~Kg~~ph~L~--MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~-----~~~~~~~~~~i~ 476 (700)
T Consensus 303 ~~~f~~Qla~I~sac~s~~i~~a~FSat~-~~~--VEE~~~~i~~~~~~vivg~~~sa~~~V~QelvF~gse~~K~lA~r 379 (593)
T KOG0344 303 PEFFVEQLADIYSACQSPDIRVALFSATI-SVY--VEEWAELIKSDLKRVIVGLRNSANETVDQELVFCGSEKGKLLALR 379 (593)
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHCCC-CHH--HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEEECCHHHHHHHH
T ss_conf 15699999999998528522256632146-077--999999865053368984252576554555121104345778899
Q ss_pred HHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC-CEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCC
Q ss_conf 6310387389997120122111210146666666866371-031201469989999999997559869999800341046
Q gi|254780945|r 477 VVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTS-SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGI 555 (700)
Q Consensus 477 ~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~-~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGv 555 (700)
T Consensus 380 q~v~~g~~PP~lIfV------Qs~eRak~L~~~L~-~~~~i~v~vIh~e~~~~qrde~~~~FR~g~IwvLicTdll~RGi 452 (593)
T KOG0344 380 QLVASGFKPPVLIFV------QSKERAKQLFEELE-IYDNINVDVIHGERSQKQRDETMERFRIGKIWVLICTDLLARGI 452 (593)
T ss_pred HHHHCCCCCCEEEEE------ECHHHHHHHHHHHH-HCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEHHHHHCCC
T ss_conf 998615899748988------53888999999864-23576634676366666778999998506706888504665455
Q ss_pred CCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHCCCCCC
Q ss_conf 888765899858525474688773011667898359999708889987999999998414--258999999852063000
Q gi|254780945|r 556 DVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTE--DGFLIAEEDLKQRKEGEI 633 (700)
Q Consensus 556 dvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~~~~~~~~~~~~Rl~~l~~~~--dGf~iAe~Dl~lRG~G~~ 633 (700)
T Consensus 453 Df~gvn~VInyD~p~s~~syihrI-GRtgRag~~g~Aitfytd----~d~~~ir~iae~~~~sG~evpe~~m~~~k~~~~ 527 (593)
T KOG0344 453 DFKGVNLVINYDFPQSDLSYIHRI-GRTGRAGRSGKAITFYTD----QDMPRIRSIAEVMEQSGCEVPEKIMGIKKLSRL 527 (593)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHH-HCCCCCCCCCCEEEEECC----CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 645763689537872247888873-025788988616998632----553455568999997188633999865666655
Q ss_pred CCCHHCC
Q ss_conf 2600069
Q gi|254780945|r 634 LGIKQSG 640 (700)
Q Consensus 634 ~G~~QsG 640 (700)
T Consensus 528 ~kk~~~k 534 (593)
T KOG0344 528 KKKKLLK 534 (593)
T ss_pred HHHHHHH
T ss_conf 5555431