HHsearch alignment for GI: 254780945 and conserved domain: KOG0344
>KOG0344 consensus.
Probab=99.72 E-value=8.4e-20 Score=174.88 Aligned_cols=448 Identities=17% Similarity=0.176 Sum_probs=277.7
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCC---CCEEEEEEEEEEEEEEC-CCCCCEEEEEEECCCCEEEEEEECCC
Q ss_conf 468855489878708974013444464788899---87899999998975421-58983389999818936999995188
Q gi|254780945|r 34 GNANETRFIDLLFYHPSSFIDRHYRPKISEISE---ERIVTITGYISQHSSFQ-LQKRRPYKILLNDGTGEITLLFFYRK 109 (700)
Q Consensus 34 ~~~GI~ti~DLL~~~PrrYeDr~~~~~I~~l~~---g~~vti~g~V~~~~~~~-~~~r~~~~v~v~D~tg~i~lvfFn~~ 109 (700)
T Consensus 121 ~v~G~~~~~~l~~f~~lt~~~~~~~~ll~nl~~~~F~~Pt~iq~-----~aipvfl~~r~~lAcapTGsgK--tlaf~~P 193 (593)
T KOG0344 121 NVDGFHLPPPLLSFSDLTYDYSMNKRLLENLQELGFDEPTPIQK-----QAIPVFLEKRDVLACAPTGSGK--TLAFNLP 193 (593)
T ss_pred ECCCCCCCCCCCCCCCCCHHHHHCHHHHHHHHHCCCCCCCCCCC-----HHHHHHHCCCCEEEECCCCCCC--HHHHHHH
T ss_conf 14477788743453211104321489997676278888773100-----1156664133058863578862--0565569
Q ss_pred -HHHHHHHC----CCCCEEEEEEEEEECCCEEEEECCEEEECCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf -78998732----89888999989973187799977868962643344-4441100000000004543001345787404
Q gi|254780945|r 110 -TEMLKNVF----FEGRKITVTGKIKKLKNRIIMVHPHYIFHNSQDVN-FPLIEAVYSLPTGLSVDLFKKIIVEALSRLP 183 (700)
Q Consensus 110 -~~yl~k~l----k~G~~v~vsGKv~~~~~~~qi~hPe~~~~~~~~~~-~~~I~PIYplt~GLsqk~irk~I~~aL~~~~ 183 (700)
T Consensus 194 il~~L~~~~~~~~~~gl~a~Il~ptreLa~Qi~re~~k~~~~~~t~~~a~~~~~~~~~~q---k~a~~~~~k~dil---- 266 (593)
T KOG0344 194 ILQHLKDLSQEKHKVGLRALILSPTRELAAQIYREMRKYSIDEGTSLRAAQFSKPAYPSQ---KPAFLSDEKYDIL---- 266 (593)
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHH---CCCHHHHHHHHHH----
T ss_conf 999998752035765427888444499999999999855777787534551666653110---3324677788788----
Q ss_pred CCCCCCCHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHC-C---CCCCCCC
Q ss_conf 684338977862056999889998620458965656679999999876-6666667777655554320-3---5767877
Q gi|254780945|r 184 VLPEWIEKDLLQKKSFPSIAEAFNIIHNPRKAKDFEWTSPARERLAYD-ELLAGQIALLLMRKQFKKE-I---GIPINVE 258 (700)
Q Consensus 184 ~i~E~LP~~ll~k~~L~s~~eAL~~IH~P~~~~dle~~~~ArkRLafe-ELl~~QL~l~~~r~~~~~~-~---~~~~~~~ 258 (700)
T Consensus 267 ---i~TP~ri~~~~~~~~~~idl~~V~~lV~d-EaD---~-----lfe~~~f~~Qla~I~sac~s~~i~~a~FSat~~~~ 334 (593)
T KOG0344 267 ---ISTPMRIVGLLGLGKLNIDLSKVEWLVVD-EAD---L-----LFEPEFFVEQLADIYSACQSPDIRVALFSATISVY 334 (593)
T ss_pred ---HCCHHHHHHHHCCCCCCCHHHEEEEEEEC-HHH---H-----HHCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
T ss_conf ---61879999985589753201203567664-687---6-----50815699999999998528522256632146077
Q ss_pred ----CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHH
Q ss_conf ----5789999863024679889999999998410013430788621442236999999733444305458861279999
Q gi|254780945|r 259 ----GKIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILA 334 (700)
Q Consensus 259 ----~~~~~~f~~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA 334 (700)
T Consensus 335 VEE~~~~i~~~~~~vivg~~~sa----------------~~~V~QelvF~gse~~K~lA~rq~v~~g-----~~PP~lIf 393 (593)
T KOG0344 335 VEEWAELIKSDLKRVIVGLRNSA----------------NETVDQELVFCGSEKGKLLALRQLVASG-----FKPPVLIF 393 (593)
T ss_pred HHHHHHHHHCCCEEEEEECCHHH----------------HHHHHHHHEEEECCHHHHHHHHHHHHCC-----CCCCEEEE
T ss_conf 99999986505336898425257----------------6554555121104345778899998615-----89974898
Q ss_pred HHHHHHHHHHCCCC----CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEECCCCCCCHHH
Q ss_conf 99998621101457----86589962464225667687762134754864111201334554444178852101335688
Q gi|254780945|r 335 QQHYEFIKKYTQNT----QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQ 410 (700)
Q Consensus 335 ~QH~~~~~~~~~~~----~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViDEQHRFGV~Q 410 (700)
T Consensus 394 VQs~eRak~L~~~L~~~~~i~v~vIh~e~~~~qrde~~~~FR~g~IwvLicTd-ll~RGiDf~gvn~VInyD~p~s~~sy 472 (593)
T KOG0344 394 VQSKERAKQLFEELEIYDNINVDVIHGERSQKQRDETMERFRIGKIWVLICTD-LLARGIDFKGVNLVINYDFPQSDLSY 472 (593)
T ss_pred EECHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEEHH-HHHCCCCCCCCCEEEECCCCCHHHHH
T ss_conf 85388899999986423576634676366666778999998506706888504-66545564576368953787224788
Q ss_pred HHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHH--HHCCCCEEEEE
Q ss_conf 9987402567761010101322789999752010111102355766620799970200268999976--31038738999
Q gi|254780945|r 411 RLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKV--VLSEGKKAYWI 488 (700)
Q Consensus 411 R~~L~~Kg~~ph~L~MtATPIPRTLal~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~--~l~~g~q~y~V 488 (700)
T Consensus 473 ----------ihrIGRtgRag~~g~Aitfytd------~d~~~ir~iae~~~~sG~evpe~~m~~~k~~~~~kk------ 530 (593)
T KOG0344 473 ----------IHRIGRTGRAGRSGKAITFYTD------QDMPRIRSIAEVMEQSGCEVPEKIMGIKKLSRLKKK------ 530 (593)
T ss_pred ----------HHHHHCCCCCCCCCCEEEEECC------CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH------
T ss_conf ----------8873025788988616998632------553455568999997188633999865666655555------
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECH
Q ss_conf 71201221112101466666668663710312014699899999999975598699998003410468887658998585
Q gi|254780945|r 489 CPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENA 568 (700)
Q Consensus 489 cPlIeese~~~~~~~~~~~~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~a 568 (700)
T Consensus 531 ---------~~~k~~~~r~~I~t~~~p~-----------~~~k~~~~k~~~~ek~~~--~~~~~~~~k~~~~~~~~~~~~ 588 (593)
T KOG0344 531 ---------KLLKAASKREEISTKKFPK-----------YKKKEALEKAKSQEKKIL--KQETEIAVKKEGKIKKKVENK 588 (593)
T ss_pred ---------HHHHCCCCCCCEEEECCCC-----------CHHHHHHHHHHHHHHHHH--HHHHHHCCCCCHHHHHHHHHH
T ss_conf ---------5431554210014412455-----------306788888776778888--887664025520257788866
Q ss_pred HHCCH
Q ss_conf 25474
Q gi|254780945|r 569 EHFGL 573 (700)
Q Consensus 569 erfGL 573 (700)
T Consensus 589 ~~~~~ 593 (593)
T KOG0344 589 ENFGI 593 (593)
T ss_pred HHCCC
T ss_conf 51279