HHsearch alignment for GI: 254780945 and conserved domain: KOG0346

>KOG0346 consensus.
Probab=99.32  E-value=8.1e-10  Score=96.58  Aligned_cols=322  Identities=23%  Similarity=0.318  Sum_probs=211.3

Q ss_pred             HHHHHCCCC-CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH---------HHHCCEEEEEHHHHH
Q ss_conf             998630246-7988999999999841001343078862144223699999973344---------430545886127999
Q gi|254780945|r  264 KILRNIPFS-PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV---------EAGGQAVIMAPIGIL  333 (700)
Q Consensus       264 ~f~~~LPF~-LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~---------~~G~Q~alMaPTEIL  333 (700)
T Consensus        32 kAi~~lG~ekpTlIQs~aIplaLEg---K---DvvarArTGSGKT~AYliPllqkll~~k~t~~~e~~~sa~iLvPTkEL  105 (569)
T KOG0346          32 KAITKLGWEKPTLIQSSAIPLALEG---K---DVVARARTGSGKTAAYLIPLLQKLLAEKKTNDGEQGPSAVILVPTKEL  105 (569)
T ss_pred             HHHHHHCCCCCCHHHHCCCCHHHCC---C---CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHH
T ss_conf             9999717677623443221243248---6---314652268871378899999999976403643246306999250999


Q ss_pred             HHHHHHHHHHHCCCC--CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHH----HCCCCC--CCCCCCEEEECCCC-
Q ss_conf             999998621101457--865899624642256676877621347548641112----013345--54444178852101-
Q gi|254780945|r  334 AQQHYEFIKKYTQNT--QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHA----LFQDSI--QYYKLILVIVDEQH-  404 (700)
Q Consensus       334 A~QH~~~~~~~~~~~--~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHA----L~q~~v--~F~~LgLvViDEQH-  404 (700)
T Consensus       106 ~qQvy~viekL~~~c~k~lr~~nl~s~~sdsv~~~----~L~d~pdIvV~TP~~ll~~~~~~~~~~~~~l~~LVvDEADL  181 (569)
T KOG0346         106 AQQVYKVIEKLVEYCSKDLRAINLASSMSDSVNSV----ALMDLPDIVVATPAKLLRHLAAGVLEYLDSLSFLVVDEADL  181 (569)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH----HHCCCCCEEEECHHHHHHHHHHCCCHHHHHEEEEEECHHHH
T ss_conf             99999999999998787655542103311677788----87059975871718899998606302120102578503566


Q ss_pred             --CCCHHHHHHH-HHCC-CCCCCEEECHHHHHHHHHHH---HHHCCCHHHH--CCCCCCCCCCEEEEEECCC---HHHHH
Q ss_conf             --3356889987-4025-67761010101322789999---7520101111--0235576662079997020---02689
Q gi|254780945|r  405 --RFGVQQRLKL-TQKA-TAPHVLLMTATPIPRTLVLT---SLGDIDISKI--TEKPAGRKPIKTVIIPINR---IDEVI  472 (700)
Q Consensus       405 --RFGV~QR~~L-~~Kg-~~ph~L~MtATPIPRTLal~---~ygdldvS~i--~e~P~gR~~I~T~~~~~~~---~~~~~  472 (700)
T Consensus       182 llsfGYeedlk~l~~~LPr~~Q~~LmSATl~dDv~~LKkL~l~nPvi-Lkl~e~el~-~~dqL~Qy~v~cse~DKfllly  259 (569)
T KOG0346         182 LLSFGYEEDLKKLRSHLPRIYQCFLMSATLSDDVQALKKLFLHNPVI-LKLTEGELP-NPDQLTQYQVKCSEEDKFLLLY  259 (569)
T ss_pred             HHHCCCHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHCCCCEE-EEECCCCCC-CCCCCEEEEEEECCCHHHHHHH
T ss_conf             64236088899998748825650200313556799999975169768-983266689-8452258999703530688999


Q ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH--HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf             99976310387389997120122111210146666--6668663710312014699899999999975598699998003
Q gi|254780945|r  473 ERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERF--NSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTV  550 (700)
Q Consensus       473 ~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~--~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtv  550 (700)
T Consensus       260 allKL~LI~gKsliFV------------NtIdr~YrLkLfLeqFGiksciLNseLP~NSR~Hii~QFNkG~YdivIAtD~  327 (569)
T KOG0346         260 ALLKLRLIRGKSLIFV------------NTIDRCYRLKLFLEQFGIKSCILNSELPANSRCHIIEQFNKGLYDIVIATDD  327 (569)
T ss_pred             HHHHHHHHCCCEEEEE------------ECHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCC
T ss_conf             9999988627549998------------5002468899999980737665256466432122898860761159997067


Q ss_pred             -----------------------------------HHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             -----------------------------------410468887658998585254746887730116678983599997
Q gi|254780945|r  551 -----------------------------------IEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILL  595 (700)
Q Consensus       551 -----------------------------------iEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~  595 (700)
T Consensus       328 s~~~~~~eee~kgk~~e~~~kndkkskkK~D~E~GVsRGIDF~~V~~VlNFD~P~t~~sYIHR-vGRTaRg~n~GtalSf  406 (569)
T KOG0346         328 SADGDKLEEEVKGKSDEKNPKNDKKSKKKLDKESGVSRGIDFHHVSNVLNFDFPETVTSYIHR-VGRTARGNNKGTALSF  406 (569)
T ss_pred             CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHCCCCCHHEEEEEECCCCCCHHHHHHH-CCCCCCCCCCCCEEEE
T ss_conf             641355521112544456887742124445701121216540121145613789854788886-1222347898725999


Q ss_pred             ECCCCCHHHHHHHHHH
Q ss_conf             0888998799999999
Q gi|254780945|r  596 YHPPLSKNSYTRLSVL  611 (700)
Q Consensus       596 ~~~~~~~~~~~Rl~~l  611 (700)
T Consensus       407 v~P~-e~~g~~~le~~  421 (569)
T KOG0346         407 VSPK-EEFGKESLESI  421 (569)
T ss_pred             ECCH-HHHHHHHHHHH
T ss_conf             6646-77606679999