HHsearch alignment for GI: 254780945 and conserved domain: KOG0346
>KOG0346 consensus.
Probab=99.32 E-value=8.1e-10 Score=96.58 Aligned_cols=322 Identities=23% Similarity=0.318 Sum_probs=211.3
Q ss_pred HHHHHCCCC-CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH---------HHHCCEEEEEHHHHH
Q ss_conf 998630246-7988999999999841001343078862144223699999973344---------430545886127999
Q gi|254780945|r 264 KILRNIPFS-PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV---------EAGGQAVIMAPIGIL 333 (700)
Q Consensus 264 ~f~~~LPF~-LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~---------~~G~Q~alMaPTEIL 333 (700)
T Consensus 32 kAi~~lG~ekpTlIQs~aIplaLEg---K---DvvarArTGSGKT~AYliPllqkll~~k~t~~~e~~~sa~iLvPTkEL 105 (569)
T KOG0346 32 KAITKLGWEKPTLIQSSAIPLALEG---K---DVVARARTGSGKTAAYLIPLLQKLLAEKKTNDGEQGPSAVILVPTKEL 105 (569)
T ss_pred HHHHHHCCCCCCHHHHCCCCHHHCC---C---CEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHH
T ss_conf 9999717677623443221243248---6---314652268871378899999999976403643246306999250999
Q ss_pred HHHHHHHHHHHCCCC--CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHH----HCCCCC--CCCCCCEEEECCCC-
Q ss_conf 999998621101457--865899624642256676877621347548641112----013345--54444178852101-
Q gi|254780945|r 334 AQQHYEFIKKYTQNT--QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHA----LFQDSI--QYYKLILVIVDEQH- 404 (700)
Q Consensus 334 A~QH~~~~~~~~~~~--~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHA----L~q~~v--~F~~LgLvViDEQH- 404 (700)
T Consensus 106 ~qQvy~viekL~~~c~k~lr~~nl~s~~sdsv~~~----~L~d~pdIvV~TP~~ll~~~~~~~~~~~~~l~~LVvDEADL 181 (569)
T KOG0346 106 AQQVYKVIEKLVEYCSKDLRAINLASSMSDSVNSV----ALMDLPDIVVATPAKLLRHLAAGVLEYLDSLSFLVVDEADL 181 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH----HHCCCCCEEEECHHHHHHHHHHCCCHHHHHEEEEEECHHHH
T ss_conf 99999999999998787655542103311677788----87059975871718899998606302120102578503566
Q ss_pred --CCCHHHHHHH-HHCC-CCCCCEEECHHHHHHHHHHH---HHHCCCHHHH--CCCCCCCCCCEEEEEECCC---HHHHH
Q ss_conf --3356889987-4025-67761010101322789999---7520101111--0235576662079997020---02689
Q gi|254780945|r 405 --RFGVQQRLKL-TQKA-TAPHVLLMTATPIPRTLVLT---SLGDIDISKI--TEKPAGRKPIKTVIIPINR---IDEVI 472 (700)
Q Consensus 405 --RFGV~QR~~L-~~Kg-~~ph~L~MtATPIPRTLal~---~ygdldvS~i--~e~P~gR~~I~T~~~~~~~---~~~~~ 472 (700)
T Consensus 182 llsfGYeedlk~l~~~LPr~~Q~~LmSATl~dDv~~LKkL~l~nPvi-Lkl~e~el~-~~dqL~Qy~v~cse~DKfllly 259 (569)
T KOG0346 182 LLSFGYEEDLKKLRSHLPRIYQCFLMSATLSDDVQALKKLFLHNPVI-LKLTEGELP-NPDQLTQYQVKCSEEDKFLLLY 259 (569)
T ss_pred HHHCCCHHHHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHCCCCEE-EEECCCCCC-CCCCCEEEEEEECCCHHHHHHH
T ss_conf 64236088899998748825650200313556799999975169768-983266689-8452258999703530688999
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHH--HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEEEECHH
Q ss_conf 99976310387389997120122111210146666--6668663710312014699899999999975598699998003
Q gi|254780945|r 473 ERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERF--NSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTV 550 (700)
Q Consensus 473 ~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~--~~l~~~~~~~v~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtv 550 (700)
T Consensus 260 allKL~LI~gKsliFV------------NtIdr~YrLkLfLeqFGiksciLNseLP~NSR~Hii~QFNkG~YdivIAtD~ 327 (569)
T KOG0346 260 ALLKLRLIRGKSLIFV------------NTIDRCYRLKLFLEQFGIKSCILNSELPANSRCHIIEQFNKGLYDIVIATDD 327 (569)
T ss_pred HHHHHHHHCCCEEEEE------------ECHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCC
T ss_conf 9999988627549998------------5002468899999980737665256466432122898860761159997067
Q ss_pred -----------------------------------HHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf -----------------------------------410468887658998585254746887730116678983599997
Q gi|254780945|r 551 -----------------------------------IEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCILL 595 (700)
Q Consensus 551 -----------------------------------iEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l~ 595 (700)
T Consensus 328 s~~~~~~eee~kgk~~e~~~kndkkskkK~D~E~GVsRGIDF~~V~~VlNFD~P~t~~sYIHR-vGRTaRg~n~GtalSf 406 (569)
T KOG0346 328 SADGDKLEEEVKGKSDEKNPKNDKKSKKKLDKESGVSRGIDFHHVSNVLNFDFPETVTSYIHR-VGRTARGNNKGTALSF 406 (569)
T ss_pred CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCHHCCCCCHHEEEEEECCCCCCHHHHHHH-CCCCCCCCCCCCEEEE
T ss_conf 641355521112544456887742124445701121216540121145613789854788886-1222347898725999
Q ss_pred ECCCCCHHHHHHHHHH
Q ss_conf 0888998799999999
Q gi|254780945|r 596 YHPPLSKNSYTRLSVL 611 (700)
Q Consensus 596 ~~~~~~~~~~~Rl~~l 611 (700)
T Consensus 407 v~P~-e~~g~~~le~~ 421 (569)
T KOG0346 407 VSPK-EEFGKESLESI 421 (569)
T ss_pred ECCH-HHHHHHHHHHH
T ss_conf 6646-77606679999