HHsearch alignment for GI: 254780945 and conserved domain: KOG0347
>KOG0347 consensus.
Probab=99.51 E-value=1.9e-12 Score=117.20 Aligned_cols=371 Identities=23% Similarity=0.322 Sum_probs=238.3
Q ss_pred HHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH--------------HHHHHCC--EE
Q ss_conf 999863024-679889999999998410013430788621442236999999733--------------4443054--58
Q gi|254780945|r 263 QKILRNIPF-SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAA--------------AVEAGGQ--AV 325 (700)
Q Consensus 263 ~~f~~~LPF-~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~--------------~~~~G~Q--~a 325 (700)
T Consensus 193 L~aL~~~gFs~Pt~IQsl~lp~ai~gk~-----DIlGaAeTGSGKTLAFGIPiv~~l~~~s~~s~e~~~~~~k~~k~~~L 267 (731)
T KOG0347 193 LRALSNLGFSRPTEIQSLVLPAAIRGKV-----DILGAAETGSGKTLAFGIPIVERLLESSDDSQELSNTSAKYVKPIAL 267 (731)
T ss_pred HHHHHHCCCCCCCCCHHHCCCHHHCCCH-----HCCCCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCEEE
T ss_conf 9999864789986104411667654630-----00033346887424412325454330365376544677605764038
Q ss_pred EEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEC----HHHCCCCC----CCCCCCE
Q ss_conf 861279999999986211014578658996246422566768776213475486411----12013345----5444417
Q gi|254780945|r 326 IMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT----HALFQDSI----QYYKLIL 397 (700)
Q Consensus 326 lMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGT----HAL~q~~v----~F~~LgL 397 (700)
T Consensus 268 V~tPTRELa~QV~~Hl~ai~~~t~i~v~si~GGLavqKQqRlL~~----~p~IVVATPGRlweli~e~n~~l~~~k~vkc 343 (731)
T KOG0347 268 VVTPTRELAHQVKQHLKAIAEKTQIRVASITGGLAVQKQQRLLNQ----RPDIVVATPGRLWELIEEDNTHLGNFKKVKC 343 (731)
T ss_pred EECCHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHHHHHHHCEE
T ss_conf 963709999999999998613467278875230579999999852----9987993662899999751066642332407
Q ss_pred EEECCCCCCCHHHH------HHHHH------CCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHC----------------
Q ss_conf 88521013356889------98740------256776101010132278999975201011110----------------
Q gi|254780945|r 398 VIVDEQHRFGVQQR------LKLTQ------KATAPHVLLMTATPIPRTLVLTSLGDIDISKIT---------------- 449 (700)
Q Consensus 398 vViDEQHRFGV~QR------~~L~~------Kg~~ph~L~MtATPIPRTLal~~ygdldvS~i~---------------- 449 (700)
T Consensus 344 LVlDEaDRmv--ekghF~Els~lL~~L~e~~~~~qrQTlVFSATl-----t~~~~~--~~~~~~k~~~k~~~~~~kiq~L 414 (731)
T KOG0347 344 LVLDEADRMV--EKGHFEELSKLLKHLNEEQKNRQRQTLVFSATL-----TLVLQQ--PLSSSRKKKDKEDELNAKIQHL 414 (731)
T ss_pred EEECCHHHHH--HHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEE-----EHHHCC--HHHHHHHCCCHHHHHHHHHHHH
T ss_conf 8873477775--511099999999986031105101258998776-----333217--0577654221145566799999
Q ss_pred --CCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCC------------CCCCCCHHHHHHHHHHHHCC
Q ss_conf --2355766620799970200268999976310387389997120122------------11121014666666686637
Q gi|254780945|r 450 --EKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEK------------KESNFRSVVERFNSLHEHFT 515 (700)
Q Consensus 450 --e~P~gR~~I~T~~~~~~~~~~~~~~i~~~l~~g~q~y~VcPlIees------------e~~~~~~~~~~~~~l~~~~~ 515 (700)
T Consensus 415 mk~ig~~~kp---kiiD~t~q~~ta~~l~Es-------~I~C~~~eKD~ylyYfl~ryPGrTlVF~NsId~vKRLt~~L~ 484 (731)
T KOG0347 415 MKKIGFRGKP---KIIDLTPQSATASTLTES-------LIECPPLEKDLYLYYFLTRYPGRTLVFCNSIDCVKRLTVLLN 484 (731)
T ss_pred HHHHCCCCCC---EEEECCCCHHHHHHHHHH-------HHCCCCCCCCEEEEEEEEECCCCEEEEECHHHHHHHHHHHHH
T ss_conf 9984756898---267668204478888877-------635885445406899886369835998411889999999974
Q ss_pred C-CE--ECCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 1-03--12014699899999999975598699998003410468887658998585254746887730116678983599
Q gi|254780945|r 516 S-SI--AIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSC 592 (700)
Q Consensus 516 ~-~v--~~lHGkm~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c 592 (700)
T Consensus 485 ~L~i~p~~LHA~M~QKqRLknLEkF~~~~~~VLiaTDVAARGLDIp~V~HVIHYqVPrtseiYVHR-SGRTARA~~~Gvs 563 (731)
T KOG0347 485 NLDIPPLPLHASMIQKQRLKNLEKFKQSPSGVLIATDVAARGLDIPGVQHVIHYQVPRTSEIYVHR-SGRTARANSEGVS 563 (731)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCEEEEEECCCCCCEEEEC-CCCCCCCCCCCEE
T ss_conf 169997102577889999876998744888179962344425888786367896068753246762-6653225678837
Q ss_pred EEEECCCCCHHHHHHH-HHHHHHCHH--HHHHHHHH------HHCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9970888998799999-999841425--89999998------52063000260006987440003887599999999999
Q gi|254780945|r 593 ILLYHPPLSKNSYTRL-SVLKNTEDG--FLIAEEDL------KQRKEGEILGIKQSGMPKFLIAQPELHDSLLEIARKDA 663 (700)
Q Consensus 593 ~l~~~~~~~~~~~~Rl-~~l~~~~dG--f~iAe~Dl------~lRG~G~~~G~~QsG~~~~~~~d~~~d~~ll~~a~~~a 663 (700)
T Consensus 564 vml~~P~e-~~~~~KL~ktL~k~~dlpifPv-~~~~m~~lkeRvrLA~ei~------~~e~k~~~v~~~~sWlkkaA~el 635 (731)
T KOG0347 564 VMLCGPQE-VGPLKKLCKTLKKKEDLPIFPV-ETDIMDALKERVRLAREID------KLEIKSKRVRKEESWLKKAADEL 635 (731)
T ss_pred EEEECHHH-HHHHHHHHHHHHHCCCCCCEEC-CHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99868177-5789999998732367773002-1789999999999999888------76644302321178999999982
Q ss_pred HHHHHHC
Q ss_conf 9999848
Q gi|254780945|r 664 KHILTQD 670 (700)
Q Consensus 664 ~~~~~~d 670 (700)
T Consensus 636 ~id~d~d 642 (731)
T KOG0347 636 GIDVDED 642 (731)
T ss_pred CCCCCCC
T ss_conf 8765555