HHsearch alignment for GI: 254780945 and conserved domain: KOG0354
>KOG0354 consensus.
Probab=99.80 E-value=1.5e-17 Score=157.15 Aligned_cols=329 Identities=21% Similarity=0.325 Sum_probs=210.2
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH--HCCEEEEEHHHHHHHHHHHHH
Q ss_conf 998630246798899999999984100134307886214422369999997334443--054588612799999999862
Q gi|254780945|r 264 KILRNIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEA--GGQAVIMAPIGILAQQHYEFI 341 (700)
Q Consensus 264 ~f~~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~--G~Q~alMaPTEILA~QH~~~~ 341 (700)
T Consensus 54 ~~~~p~~~~lR~YQ~eivq---~ALgk----Ntii~lPTG~GKTfIAa~Vm~nh~rw~p~~KiVF~aP~~pLv~QQ~a~~ 126 (746)
T KOG0354 54 RWIYPTNLELRNYQEELVQ---PALGK----NTIIALPTGSGKTFIAAVIMKNHFEWRPKGKVVFLAPTRPLVNQQIACF 126 (746)
T ss_pred CCCCCCCCCCCHHHHHHHH---HHHCC----CEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHH
T ss_conf 4104676656078999867---86268----7699953599861047999999972377643899607711788889887
Q ss_pred HHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCC------CCCCCCEEEECCCCCC------CHH
Q ss_conf 1101457865899624642256676877621347548641112013345------5444417885210133------568
Q gi|254780945|r 342 KKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSI------QYYKLILVIVDEQHRF------GVQ 409 (700)
Q Consensus 342 ~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v------~F~~LgLvViDEQHRF------GV~ 409 (700)
T Consensus 127 ~~~~~~~~-~T~~l~~~~~~~~r~~i~~-----s~~vff~TpQil~ndL~~~~~~~ls~fs~iv~DE~Hra~kn~~Y~~V 200 (746)
T KOG0354 127 SIYLIPYS-VTGQLGDTVPRSNRGEIVA-----SKRVFFRTPQILENDLKSGLHDELSDFSLIVFDECHRTSKNHPYNNI 200 (746)
T ss_pred HHCCCCCC-CEEECCCCCCCCCHHHHHC-----CCCEEEECHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHH
T ss_conf 62067601-0455057568876245310-----26358967276343325433454551799997222445556617999
Q ss_pred HHHHHHHCCCCCCCEEECHHHHHHHHHHH-----HHHCCCHHHHCCC----CCCCCCCEEEEEE----CCC----HHHHH
Q ss_conf 89987402567761010101322789999-----7520101111023----5576662079997----020----02689
Q gi|254780945|r 410 QRLKLTQKATAPHVLLMTATPIPRTLVLT-----SLGDIDISKITEK----PAGRKPIKTVIIP----INR----IDEVI 472 (700)
Q Consensus 410 QR~~L~~Kg~~ph~L~MtATPIPRTLal~-----~ygdldvS~i~e~----P~gR~~I~T~~~~----~~~----~~~~~ 472 (700)
T Consensus 201 mr~~l~~k~~~~qILgLTASpG~~~~~v~~~I~~L~asldvr~~ssi~~~y~~l-r~~~~i~v~~~~~~~~~~~~f~~~i 279 (746)
T KOG0354 201 MREYLDLKNQGNQILGLTASPGSKLEQVQNVIDNLCASLDVRTESSIKSNYEEL-REHVQIPVDLSLCERDIEDPFGMII 279 (746)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHHH-HCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 999998651466179985588845899999998520332555044565418987-2467524758876411343699999
Q ss_pred HHHHHHHC--------CCCEEE--EEE-------CCCCCCCC--------------------------------------
Q ss_conf 99976310--------387389--997-------12012211--------------------------------------
Q gi|254780945|r 473 ERLKVVLS--------EGKKAY--WIC-------PQIEEKKE-------------------------------------- 497 (700)
Q Consensus 473 ~~i~~~l~--------~g~q~y--~Vc-------PlIeese~-------------------------------------- 497 (700)
T Consensus 280 ~p~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~f~~~~~~~~~~~ll~~~gir~~~~l~~~~~f~~e~~ 359 (746)
T KOG0354 280 EPLLQQLQEEGLIEISDKSTSYEQWVVQAEKAAAPNGPENQRNCFYALHLRKYNLALLISDGIRFVDALDYLEDFYEEVA 359 (746)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
T ss_conf 99999998638541024333444404330022236887432036789999987888876323403777765554300000
Q ss_pred -------------------------------------C-----------------------C-CCHHHHHHHHHHHHC-C
Q ss_conf -------------------------------------1-----------------------2-101466666668663-7
Q gi|254780945|r 498 -------------------------------------S-----------------------N-FRSVVERFNSLHEHF-T 515 (700)
Q Consensus 498 -------------------------------------~-----------------------~-~~~~~~~~~~l~~~~-~ 515 (700)
T Consensus 360 ~~k~~~~~~e~~~~~~~~~~m~~~~~l~~~~~~~npkle~l~~~l~e~f~~~~dsR~IIFve~R~sa~~l~~~l~~~~~~ 439 (746)
T KOG0354 360 LKKYLKLELEARLIRNFTENMNELEHLSLDPPKENPKLEKLVEILVEQFEQNPDSRTIIFVETRESALALKKWLLQLHEL 439 (746)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHC
T ss_conf 46788987422106778898876443202787668469999999999860598850799973288999999999754013
Q ss_pred C-C----EECCCC----CCCHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCC
Q ss_conf 1-0----312014----699899999999975598699998003410468887658998585254746887730116678
Q gi|254780945|r 516 S-S----IAIIHG----RMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRG 586 (700)
Q Consensus 516 ~-~----v~~lHG----km~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg 586 (700)
T Consensus 440 ~ir~~~fiGq~~s~~~~gmtqk~Q~evl~~Fr~G~~NvLVATSV~EEGLDI~ec~lVIcYd~~sn-pIrmIQrrGR-gR- 516 (746)
T KOG0354 440 GIKAEIFIGQGKSTQSTGMTQKEQKEVLDKFRDGEINVLVATSVAEEGLDIGECNLVICYDYSSN-PIRMVQRRGR-GR- 516 (746)
T ss_pred CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCEEEEECCCCC-HHHHHHHHCC-CC-
T ss_conf 54402156035445444457899999999985798027998101004677421128999657766-8899998631-01-
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHH
Q ss_conf 983599997088899879999999
Q gi|254780945|r 587 EEISSCILLYHPPLSKNSYTRLSV 610 (700)
Q Consensus 587 ~~~s~c~l~~~~~~~~~~~~Rl~~ 610 (700)
T Consensus 517 a~ns~~vll~t-~~~~~~~E~~~~ 539 (746)
T KOG0354 517 ARNSKCVLLTT-GSEVIEFERNNL 539 (746)
T ss_pred CCCCEEEEEEC-CHHHHHHHHHHH
T ss_conf 01876999972-516889988887