HHsearch alignment for GI: 254780945 and conserved domain: KOG0390
>KOG0390 consensus.
Probab=97.88 E-value=0.0046 Score=43.62 Aligned_cols=330 Identities=17% Similarity=0.176 Sum_probs=200.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCC----CCEEEEEECCCCCHHHHHHHHHHHHHHHHCC-------EEEEEHHHHHHHHHH
Q ss_conf 24679889999999998410013----4307886214422369999997334443054-------588612799999999
Q gi|254780945|r 270 PFSPTKSQESAIKDILQDMSQKN----RMLRILQGDVGSGKTLVALIAMAAAVEAGGQ-------AVIMAPIGILAQQHY 338 (700)
Q Consensus 270 PF~LT~~Q~~ai~eI~~Dl~~~~----pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q-------~alMaPTEILA~QH~ 338 (700)
T Consensus 236 ~~~LrPHQ~EG~~FL~knl~g~~~~~~~~GCImAd~~GlGKTlq~IsflwtlLrq~P~~~~~~~k~lVV~P~sLv-~nWk 314 (776)
T KOG0390 236 KKILRPHQREGFEFLYKNLAGLIRPKNSGGCIMADEPGLGKTLQCISFIWTLLRQFPQAKPLINKPLVVAPSSLV-NNWK 314 (776)
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHH-HHHH
T ss_conf 641281578778997864113111588875472078876407888999999998686755444660798458888-7899
Q ss_pred HHHHHHCCCCCCEEEEEECCCCH--HHHHHHHHH--HCCCCCEEEEECHHHC--CCCCCCCCCCEEEECCCCCCCHHHHH
Q ss_conf 86211014578658996246422--566768776--2134754864111201--33455444417885210133568899
Q gi|254780945|r 339 EFIKKYTQNTQIIVEIITGNMPQ--AHRRKALER--IAHGQAHIIIGTHALF--QDSIQYYKLILVIVDEQHRFGVQQRL 412 (700)
Q Consensus 339 ~~~~~~~~~~~i~v~lLtg~~~~--~er~~i~~~--i~~G~~~iiIGTHAL~--q~~v~F~~LgLvViDEQHRFGV~QR~ 412 (700)
T Consensus 315 kEF~KWl~~~~i~~l~~~~~~~~~w~~~~sil~~~~~~~~~~vli~sye~~~~~~~~il~~~~glLVcDEGHrlk-N~~s 393 (776)
T KOG0390 315 KEFGKWLGNHRINPLDFYSTKKSSWIKLKSILFLGYKQFTTPVLIISYETASDYCRKILLIRPGLLVCDEGHRLK-NSDS 393 (776)
T ss_pred HHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCC-CHHH
T ss_conf 999874253555404542345256666678988622112578786369999999999854789869977988856-2245
Q ss_pred HHH---HCCCCCCCEEECHHHHHHHHHHHHHHCCCHH-------------------------------------------
Q ss_conf 874---0256776101010132278999975201011-------------------------------------------
Q gi|254780945|r 413 KLT---QKATAPHVLLMTATPIPRTLVLTSLGDIDIS------------------------------------------- 446 (700)
Q Consensus 413 ~L~---~Kg~~ph~L~MtATPIPRTLal~~ygdldvS------------------------------------------- 446 (700)
T Consensus 394 ~~~kaL~~l~t~rRVLLSGTp~QNdl~E-yFnlL~fvrP~~Lgs~~sf~k~~~~~i~~~~~~~~s~e~~~~~~rl~eL~~ 472 (776)
T KOG0390 394 LTLKALSSLKTPRRVLLTGTPIQNDLKE-YFNLLDFVRPGFLGSISSFKKKFEIPILRGRDADASEEDREREERLQELRE 472 (776)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHH-HHHHHHHCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8999997468773699607753346999-978885157011255378887751344235677855354525799999999
Q ss_pred ------------H-HCCCCCCCCCCEEEEEEC-CCHHHHHHHHHHHHCCCCEEEEEECCCC-------------------
Q ss_conf ------------1-102355766620799970-2002689999763103873899971201-------------------
Q gi|254780945|r 447 ------------K-ITEKPAGRKPIKTVIIPI-NRIDEVIERLKVVLSEGKKAYWICPQIE------------------- 493 (700)
Q Consensus 447 ------------~-i~e~P~gR~~I~T~~~~~-~~~~~~~~~i~~~l~~g~q~y~VcPlIe------------------- 493 (700)
T Consensus 473 ~t~~fi~rrt~~il~k~LP~--k~e~vv~~n~t~~Q~~~~~~l~~~~--~~~~~~~~~l~~~~~L~k~cnhP~L~~~~~~ 548 (776)
T KOG0390 473 LTNKFILRRTGDILLKYLPG--KYEYVVFCNPTPIQKELYKKLLDSM--KMRTLKGYALELITKLKKLCNHPSLLLLCEK 548 (776)
T ss_pred HHHHHEEECCCCHHHHHCCC--CEEEEEEECCCHHHHHHHHHHHHHH--HHHHHHCCHHHHHHHHHHHHCCHHHHCCCCC
T ss_conf 99765221112034553888--5469999578089999999998777--7654313225588998987368776313322
Q ss_pred -CCCCCC------------------------------------------------CCHHHHHHHHHHHHCCCCEECCCCC
Q ss_conf -221112------------------------------------------------1014666666686637103120146
Q gi|254780945|r 494 -EKKESN------------------------------------------------FRSVVERFNSLHEHFTSSIAIIHGR 524 (700)
Q Consensus 494 -ese~~~------------------------------------------------~~~~~~~~~~l~~~~~~~v~~lHGk 524 (700)
T Consensus 549 ~~~e~~~~~~~~~~~~~~~~~~~~~~~ks~kl~~L~~ll~~~~ek~~~~~v~Isny~~tldl~e~~~~~~g~~~~rLdG~ 628 (776)
T KOG0390 549 TEKEKAFKNPALLLDPGKLKLDAGDGSKSGKLLVLVFLLEVIREKLLVKSVLISNYTQTLDLFEQLCRWRGYEVLRLDGK 628 (776)
T ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 34441226857650321246665551156689999999999865223179996228999999999976538448997387
Q ss_pred CCHHHHHHHHHHHHCCCEE---EEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEEEEE---EECC
Q ss_conf 9989999999997559869---999800341046888765899858525474688773011667898359999---7088
Q gi|254780945|r 525 MSDIDKESVMDSFKNGTCK---LLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCIL---LYHP 598 (700)
Q Consensus 525 m~~~ek~~~m~~F~~g~~~---iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~c~l---~~~~ 598 (700)
T Consensus 629 ~~~~qRq~~vd~FN~p~~~~~vfLlSsKAgg~GinLiGAsRlil~D~d-WNPa~d~QAmaR~~RdGQKk~v~iYrLlatG 707 (776)
T KOG0390 629 TSIKQRQKLVDTFNDPESPSFVFLLSSKAGGEGLNLIGASRLILFDPD-WNPAVDQQAMARAWRDGQKKPVYIYRLLATG 707 (776)
T ss_pred CCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCCEEEEECCC-CCCHHHHHHHHHHCCCCCCCEEEEEEEECCC
T ss_conf 766888899873359988741899854455576320134038995799-9823678999976457874268999963279
Q ss_pred CCCHHHHHH
Q ss_conf 899879999
Q gi|254780945|r 599 PLSKNSYTR 607 (700)
Q Consensus 599 ~~~~~~~~R 607 (700)
T Consensus 708 tiEEk~~qr 716 (776)
T KOG0390 708 TIEEKIYQR 716 (776)
T ss_pred CCHHHHHHH
T ss_conf 813888999