HHsearch alignment for GI: 254780945 and conserved domain: KOG0392
>KOG0392 consensus.
Probab=96.32 E-value=0.13 Score=32.33 Aligned_cols=311 Identities=20% Similarity=0.333 Sum_probs=175.2
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHH--HHHHH-------HHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 0134307886214422369999997--33444-------30545886127999999998621101457865899624642
Q gi|254780945|r 290 QKNRMLRILQGDVGSGKTLVALIAM--AAAVE-------AGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMP 360 (700)
Q Consensus 290 ~~~pM~RLLQGDVGSGKTiVA~~A~--l~~~~-------~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~ 360 (700)
T Consensus 991 nky~LHGILcDDMGLGKTLQticilAsd~y~r~s~~~e~~~~PSLIVCP-sTLtGHW~~E~~kf~pfL--~v~~yvg~-- 1065 (1549)
T KOG0392 991 NKYKLHGILCDDMGLGKTLQTICILASDHYKRRSESSEFNRLPSLIVCP-STLTGHWKSEVKKFFPFL--KVLQYVGP-- 1065 (1549)
T ss_pred HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECC-CHHHHHHHHHHHHHCCHH--HHHHHCCC--
T ss_conf 8733354542134632789999999788875024660113587589887-001148999998756301--23431377--
Q ss_pred HHHHHHHHHHHCCCCCEEEEECHHHCCCCCCC---CCCCEEEECCCCCCCHHHHHHHHH--CC-CCCCCEEECHHHHHHH
Q ss_conf 25667687762134754864111201334554---444178852101335688998740--25-6776101010132278
Q gi|254780945|r 361 QAHRRKALERIAHGQAHIIIGTHALFQDSIQY---YKLILVIVDEQHRFGVQQRLKLTQ--KA-TAPHVLLMTATPIPRT 434 (700)
Q Consensus 361 ~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F---~~LgLvViDEQHRFGV~QR~~L~~--Kg-~~ph~L~MtATPIPRT 434 (700)
T Consensus 1066 p~~r~~lR~q~~~~--~iiVtSYDv~RnD~d~l~~~~wNYcVLDEGHVikN-~ktkl~kavkqL~a~hRLILSGTPIQNn 1142 (1549)
T KOG0392 1066 PAERRELRDQYKNA--NIIVTSYDVVRNDVDYLIKIDWNYCVLDEGHVIKN-SKTKLTKAVKQLRANHRLILSGTPIQNN 1142 (1549)
T ss_pred HHHHHHHHHHCCCC--CEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEECC-HHHHHHHHHHHHHHCCEEEEECCCCCCC
T ss_conf 58777777543666--56996589988789999855222699407604211-3889999999976402377408876667
Q ss_pred H-----------------------------------------------HHHH---------HHCCCHHHHCCCCCCCCCC
Q ss_conf 9-----------------------------------------------9997---------5201011110235576662
Q gi|254780945|r 435 L-----------------------------------------------VLTS---------LGDIDISKITEKPAGRKPI 458 (700)
Q Consensus 435 L-----------------------------------------------al~~---------ygdldvS~i~e~P~gR~~I 458 (700)
T Consensus 1143 vleLWSLFdFLMPGfLGtEKqFqsrf~kpI~asRd~K~Sske~EaG~lAleaLHKqVLPF~LRRlKedVL~DLPp--KII 1220 (1549)
T KOG0392 1143 VLELWSLFDFLMPGFLGTEKQFQSRFGKPILASRDPKSSSKEQEAGVLALEALHKQVLPFLLRRLKEDVLKDLPP--KII 1220 (1549)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHH
T ss_conf 999999999846665671888988755504542386556667876488999999988899999988888764885--653
Q ss_pred EEEEEECCC-HHHHHHHHHHH-------------HCCC------------------CEEEEEECC------C--------
Q ss_conf 079997020-02689999763-------------1038------------------738999712------0--------
Q gi|254780945|r 459 KTVIIPINR-IDEVIERLKVV-------------LSEG------------------KKAYWICPQ------I-------- 492 (700)
Q Consensus 459 ~T~~~~~~~-~~~~~~~i~~~-------------l~~g------------------~q~y~VcPl------I-------- 492 (700)
T Consensus 1221 QDyyCeLs~lQ~kLY~df~~~~k~~~~~~~d~~~~S~gt~~~HvFqaLqYlrKLcnHpaLvlt~~hp~la~i~~~l~~~~ 1300 (1549)
T KOG0392 1221 QDYYCELSPLQKKLYRDFVKKAKQCVSSQIDGGEESLGTDKTHVFQALQYLRKLCNHPALVLTPVHPDLAAIVSHLAHFN 1300 (1549)
T ss_pred HHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHH
T ss_conf 31034067899999999988750352003464321057514889999999998548964442777502999987887740
Q ss_pred ------C-------------------CC--CC--C------------CCCHHHHHH--HHHHHHCCC-CEECCCCCCCHH
Q ss_conf ------1-------------------22--11--1------------210146666--666866371-031201469989
Q gi|254780945|r 493 ------E-------------------EK--KE--S------------NFRSVVERF--NSLHEHFTS-SIAIIHGRMSDI 528 (700)
Q Consensus 493 ------e-------------------es--e~--~------------~~~~~~~~~--~~l~~~~~~-~v~~lHGkm~~~ 528 (700)
T Consensus 1301 ~~LHdi~hspKl~AL~qLL~eCGig~~~~~~~g~~s~vsqHRiLIFcQlK~mlDlVekDL~k~~mpsVtymRLDGSVpp~ 1380 (1549)
T KOG0392 1301 SSLHDIQHSPKLSALKQLLSECGIGNNSDSEVGTPSDVSQHRILIFCQLKSMLDLVEKDLFKKYMPSVTYMRLDGSVPPG 1380 (1549)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf 14777653526789999999817898875333671021155168764077799999999865114751699734888907
Q ss_pred HHHHHHHHHHCC-CEEEEEECH-HHHCCCCCCCCCEEEEECHHHCCHHHHHHH---HHCCCCCCCCEEEEEEECCCCCHH
Q ss_conf 999999997559-869999800-341046888765899858525474688773---011667898359999708889987
Q gi|254780945|r 529 DKESVMDSFKNG-TCKLLIATT-VIEVGIDVVDASIIIIENAEHFGLAQLHQL---RGRVGRGEEISSCILLYHPPLSKN 603 (700)
Q Consensus 529 ek~~~m~~F~~g-~~~iLvaTt-viEVGvdvpna~~mvI~~aerfGLsqLHQL---RGRVGRg~~~s~c~l~~~~~~~~~ 603 (700)
T Consensus 1381 ~R~kiV~~FN~DptIDvLlLTThVGGLGLNLTGADTVVFvEHDWNPMrDL-QAMDRAHRIGQKrvVNVyRlItrGTLEEK 1459 (1549)
T KOG0392 1381 DRQKIVERFNEDPTIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL-QAMDRAHRIGQKRVVNVYRLITRGTLEEK 1459 (1549)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHH-HHHHHHHHHCCCEEEEEEEEHHCCCHHHH
T ss_conf 77999997168985138999620045322467875589972688832457-88778886267315666630230658998
Q ss_pred --HHHHHHHH
Q ss_conf --99999999
Q gi|254780945|r 604 --SYTRLSVL 611 (700)
Q Consensus 604 --~~~Rl~~l 611 (700)
T Consensus 1460 VMgLQkFKmn 1469 (1549)
T KOG0392 1460 VMGLQKFKMN 1469 (1549)
T ss_pred HHHHHHHHHH
T ss_conf 7657888668