HHsearch alignment for GI: 254780945 and conserved domain: KOG0392

>KOG0392 consensus.
Probab=96.32  E-value=0.13  Score=32.33  Aligned_cols=311  Identities=20%  Similarity=0.333  Sum_probs=175.2

Q ss_pred             CCCCCEEEEEECCCCCHHHHHHHHH--HHHHH-------HHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf             0134307886214422369999997--33444-------30545886127999999998621101457865899624642
Q gi|254780945|r  290 QKNRMLRILQGDVGSGKTLVALIAM--AAAVE-------AGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMP  360 (700)
Q Consensus       290 ~~~pM~RLLQGDVGSGKTiVA~~A~--l~~~~-------~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~  360 (700)
T Consensus       991 nky~LHGILcDDMGLGKTLQticilAsd~y~r~s~~~e~~~~PSLIVCP-sTLtGHW~~E~~kf~pfL--~v~~yvg~-- 1065 (1549)
T KOG0392         991 NKYKLHGILCDDMGLGKTLQTICILASDHYKRRSESSEFNRLPSLIVCP-STLTGHWKSEVKKFFPFL--KVLQYVGP-- 1065 (1549)
T ss_pred             HHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECC-CHHHHHHHHHHHHHCCHH--HHHHHCCC--
T ss_conf             8733354542134632789999999788875024660113587589887-001148999998756301--23431377--


Q ss_pred             HHHHHHHHHHHCCCCCEEEEECHHHCCCCCCC---CCCCEEEECCCCCCCHHHHHHHHH--CC-CCCCCEEECHHHHHHH
Q ss_conf             25667687762134754864111201334554---444178852101335688998740--25-6776101010132278
Q gi|254780945|r  361 QAHRRKALERIAHGQAHIIIGTHALFQDSIQY---YKLILVIVDEQHRFGVQQRLKLTQ--KA-TAPHVLLMTATPIPRT  434 (700)
Q Consensus       361 ~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F---~~LgLvViDEQHRFGV~QR~~L~~--Kg-~~ph~L~MtATPIPRT  434 (700)
T Consensus      1066 p~~r~~lR~q~~~~--~iiVtSYDv~RnD~d~l~~~~wNYcVLDEGHVikN-~ktkl~kavkqL~a~hRLILSGTPIQNn 1142 (1549)
T KOG0392        1066 PAERRELRDQYKNA--NIIVTSYDVVRNDVDYLIKIDWNYCVLDEGHVIKN-SKTKLTKAVKQLRANHRLILSGTPIQNN 1142 (1549)
T ss_pred             HHHHHHHHHHCCCC--CEEEEEHHHHHHHHHHHHHCCCCEEEECCCCEECC-HHHHHHHHHHHHHHCCEEEEECCCCCCC
T ss_conf             58777777543666--56996589988789999855222699407604211-3889999999976402377408876667


Q ss_pred             H-----------------------------------------------HHHH---------HHCCCHHHHCCCCCCCCCC
Q ss_conf             9-----------------------------------------------9997---------5201011110235576662
Q gi|254780945|r  435 L-----------------------------------------------VLTS---------LGDIDISKITEKPAGRKPI  458 (700)
Q Consensus       435 L-----------------------------------------------al~~---------ygdldvS~i~e~P~gR~~I  458 (700)
T Consensus      1143 vleLWSLFdFLMPGfLGtEKqFqsrf~kpI~asRd~K~Sske~EaG~lAleaLHKqVLPF~LRRlKedVL~DLPp--KII 1220 (1549)
T KOG0392        1143 VLELWSLFDFLMPGFLGTEKQFQSRFGKPILASRDPKSSSKEQEAGVLALEALHKQVLPFLLRRLKEDVLKDLPP--KII 1220 (1549)
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHH
T ss_conf             999999999846665671888988755504542386556667876488999999988899999988888764885--653


Q ss_pred             EEEEEECCC-HHHHHHHHHHH-------------HCCC------------------CEEEEEECC------C--------
Q ss_conf             079997020-02689999763-------------1038------------------738999712------0--------
Q gi|254780945|r  459 KTVIIPINR-IDEVIERLKVV-------------LSEG------------------KKAYWICPQ------I--------  492 (700)
Q Consensus       459 ~T~~~~~~~-~~~~~~~i~~~-------------l~~g------------------~q~y~VcPl------I--------  492 (700)
T Consensus      1221 QDyyCeLs~lQ~kLY~df~~~~k~~~~~~~d~~~~S~gt~~~HvFqaLqYlrKLcnHpaLvlt~~hp~la~i~~~l~~~~ 1300 (1549)
T KOG0392        1221 QDYYCELSPLQKKLYRDFVKKAKQCVSSQIDGGEESLGTDKTHVFQALQYLRKLCNHPALVLTPVHPDLAAIVSHLAHFN 1300 (1549)
T ss_pred             HHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHH
T ss_conf             31034067899999999988750352003464321057514889999999998548964442777502999987887740


Q ss_pred             ------C-------------------CC--CC--C------------CCCHHHHHH--HHHHHHCCC-CEECCCCCCCHH
Q ss_conf             ------1-------------------22--11--1------------210146666--666866371-031201469989
Q gi|254780945|r  493 ------E-------------------EK--KE--S------------NFRSVVERF--NSLHEHFTS-SIAIIHGRMSDI  528 (700)
Q Consensus       493 ------e-------------------es--e~--~------------~~~~~~~~~--~~l~~~~~~-~v~~lHGkm~~~  528 (700)
T Consensus      1301 ~~LHdi~hspKl~AL~qLL~eCGig~~~~~~~g~~s~vsqHRiLIFcQlK~mlDlVekDL~k~~mpsVtymRLDGSVpp~ 1380 (1549)
T KOG0392        1301 SSLHDIQHSPKLSALKQLLSECGIGNNSDSEVGTPSDVSQHRILIFCQLKSMLDLVEKDLFKKYMPSVTYMRLDGSVPPG 1380 (1549)
T ss_pred             HHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCH
T ss_conf             14777653526789999999817898875333671021155168764077799999999865114751699734888907


Q ss_pred             HHHHHHHHHHCC-CEEEEEECH-HHHCCCCCCCCCEEEEECHHHCCHHHHHHH---HHCCCCCCCCEEEEEEECCCCCHH
Q ss_conf             999999997559-869999800-341046888765899858525474688773---011667898359999708889987
Q gi|254780945|r  529 DKESVMDSFKNG-TCKLLIATT-VIEVGIDVVDASIIIIENAEHFGLAQLHQL---RGRVGRGEEISSCILLYHPPLSKN  603 (700)
Q Consensus       529 ek~~~m~~F~~g-~~~iLvaTt-viEVGvdvpna~~mvI~~aerfGLsqLHQL---RGRVGRg~~~s~c~l~~~~~~~~~  603 (700)
T Consensus      1381 ~R~kiV~~FN~DptIDvLlLTThVGGLGLNLTGADTVVFvEHDWNPMrDL-QAMDRAHRIGQKrvVNVyRlItrGTLEEK 1459 (1549)
T KOG0392        1381 DRQKIVERFNEDPTIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDL-QAMDRAHRIGQKRVVNVYRLITRGTLEEK 1459 (1549)
T ss_pred             HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHH-HHHHHHHHHCCCEEEEEEEEHHCCCHHHH
T ss_conf             77999997168985138999620045322467875589972688832457-88778886267315666630230658998


Q ss_pred             --HHHHHHHH
Q ss_conf             --99999999
Q gi|254780945|r  604 --SYTRLSVL  611 (700)
Q Consensus       604 --~~~Rl~~l  611 (700)
T Consensus      1460 VMgLQkFKmn 1469 (1549)
T KOG0392        1460 VMGLQKFKMN 1469 (1549)
T ss_pred             HHHHHHHHHH
T ss_conf             7657888668