HHsearch alignment for GI: 254780945 and conserved domain: KOG1802
>KOG1802 consensus.
Probab=95.83 E-value=0.036 Score=36.64 Aligned_cols=80 Identities=29% Similarity=0.417 Sum_probs=62.2
Q ss_pred HCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHH-HHCCEEEEEHHHHHHHHHHHHHHHHCC
Q ss_conf 3024679889999999998410013430788621442236999999733444-305458861279999999986211014
Q gi|254780945|r 268 NIPFSPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE-AGGQAVIMAPIGILAQQHYEFIKKYTQ 346 (700)
Q Consensus 268 ~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~-~G~Q~alMaPTEILA~QH~~~~~~~~~ 346 (700)
T Consensus 407 ~lp-kLN~SQ~~AV~~VL~-----rpl-sLIQGPPGTGKTvtsa~IVyhl~~~~~~~VLvcApSNiAVDqLaeKIh~t-- 477 (935)
T KOG1802 407 NLP-KLNASQSNAVKHVLQ-----RPL-SLIQGPPGTGKTVTSATIVYHLARQHAGPVLVCAPSNIAVDQLAEKIHKT-- 477 (935)
T ss_pred CCH-HHCHHHHHHHHHHHC-----CCC-EEEECCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC--
T ss_conf 961-224678999999975-----985-15546999883311689999999852895699816500289999999861--
Q ss_pred CCCCEEEEEECC
Q ss_conf 578658996246
Q gi|254780945|r 347 NTQIIVEIITGN 358 (700)
Q Consensus 347 ~~~i~v~lLtg~ 358 (700)
T Consensus 478 --gLKVvRl~ak 487 (935)
T KOG1802 478 --GLKVVRLCAK 487 (935)
T ss_pred --CCEEEEEEHH
T ss_conf --8547640021