HHsearch alignment for GI: 254780945 and conserved domain: PRK00484

>PRK00484 lysS lysyl-tRNA synthetase; Reviewed.
Probab=93.30  E-value=0.77  Score=26.18  Aligned_cols=97  Identities=18%  Similarity=0.209  Sum_probs=60.1

Q ss_pred             HHCCCCCCCCCCCCCHH---------HCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCC-----HH
Q ss_conf             70897401344446478---------88998789999999897542158983389999818936999995188-----78
Q gi|254780945|r   46 FYHPSSFIDRHYRPKIS---------EISEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRK-----TE  111 (700)
Q Consensus        46 ~~~PrrYeDr~~~~~I~---------~l~~g~~vti~g~V~~~~~~~~~~r~~~~v~v~D~tg~i~lvfFn~~-----~~  111 (700)
T Consensus        23 ~pyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vaGrv~~~R~---~G-k~~F~~lrD~~g~iQ~~~~~~~~~~~~~~   98 (491)
T PRK00484         23 NPYPNDFERTHTSAELQAKYADLEKEELEALIEVSVAGRVMLKRV---MG-KASFATIQDGSGRIQLYVSKDDVGEEAYE   98 (491)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC---CC-CEEEEEEEECCCCEEEEEECCCCCHHHHH
T ss_conf             999997858666999999875138533467988999987840505---69-81999999699458999966758999999


Q ss_pred             HHHHHCCCCCEEEEEEEEEEC-CCEEEEECCEEEECC
Q ss_conf             998732898889999899731-877999778689626
Q gi|254780945|r  112 MLKNVFFEGRKITVTGKIKKL-KNRIIMVHPHYIFHN  147 (700)
Q Consensus       112 yl~k~lk~G~~v~vsGKv~~~-~~~~qi~hPe~~~~~  147 (700)
T Consensus        99 ~~-~~l~~gd~i~v~G~v~~t~~Gel~v~~~~~~iLs  134 (491)
T PRK00484         99 AF-KKLDLGDIIGVEGTLFKTKTGELSVKVTELTLLT  134 (491)
T ss_pred             HH-HCCCCCCEEEEEEEEEECCCCEEEEECCEEEEEC
T ss_conf             99-6068666898787998658851664033179931