HHsearch alignment for GI: 254780945 and conserved domain: PRK02406
>PRK02406 DNA polymerase IV; Validated.
Probab=95.84 E-value=0.0068 Score=42.29 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=18.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 1442236999999733444305458861279999999986211014578658
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIV 352 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v 352 (700)
T Consensus 145 GIa~nk~l-AK~As~~~KP~G-~~-vv~~~---------~~~~~L~~lpv~~ 184 (355)
T PRK02406 145 GVAPNKFL-AKIASDWNKPNG-QF-VITPE---------EVPAFVATLPVEK 184 (355)
T ss_pred ECCCCHHH-HHHHHHHCCCCC-CE-EECHH---------HHHHHHHHCCCCC
T ss_conf 02567999-999886239876-63-65678---------9999996188740