HHsearch alignment for GI: 254780945 and conserved domain: PRK04914
>PRK04914 ATP-dependent helicase HepA; Validated.
Probab=99.29 E-value=2.1e-10 Score=101.13 Aligned_cols=318 Identities=21% Similarity=0.288 Sum_probs=176.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH--CCEEEEEHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 67988999999999841001343078862144223699999973344430--5458861279999999986211014578
Q gi|254780945|r 272 SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAG--GQAVIMAPIGILAQQHYEFIKKYTQNTQ 349 (700)
Q Consensus 272 ~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G--~Q~alMaPTEILA~QH~~~~~~~~~~~~ 349 (700)
T Consensus 151 ~l~pHQ~~ia~~v~~r~~----PRvLLADEVGLGKTIEAGLIl~ell~rgra~RvLIvvP-~~L~~QW~~EL~~KF---~ 222 (955)
T PRK04914 151 GLIPHQLYIAHEVGRRHA----PRVLLADEVGLGKTIEAGLIIHQQLLTGRAERVLIIVP-ETLQHQWLVEMLRRF---N 222 (955)
T ss_pred CCCCHHHHHHHHHHHCCC----CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECC-HHHHHHHHHHHHHHC---C
T ss_conf 656379999999971458----84897058888689999999999997487777999927-799899999999983---9
Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCC------CCEEEEECHHHC-CCCCCCC-----CCCEEEECCCCCC-----CHHHHH
Q ss_conf 6589962464225667687762134------754864111201-3345544-----4417885210133-----568899
Q gi|254780945|r 350 IIVEIITGNMPQAHRRKALERIAHG------QAHIIIGTHALF-QDSIQYY-----KLILVIVDEQHRF-----GVQQRL 412 (700)
Q Consensus 350 i~v~lLtg~~~~~er~~i~~~i~~G------~~~iiIGTHAL~-q~~v~F~-----~LgLvViDEQHRF-----GV~QR~ 412 (700)
T Consensus 223 L~f~i~D~~-----r---~~~~~~~~~NpF~~~~~vI~Sld~l~~~~~~~e~l~~a~WDLVIVDEAHhL~~~~~~~s~~y 294 (955)
T PRK04914 223 LRFSLFDEE-----R---CAEAQADADNPFETEQLVICSLDFLRKNKKRLEQALDAEWDLLVVDEAHHLVWSEEAPSREY 294 (955)
T ss_pred CCCEEECCH-----H---HHHHHCCCCCCCCCCCEEEEEHHHHCCCHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCHHH
T ss_conf 980995518-----8---88753357997545897998789960396789987338988899713445305887888799
Q ss_pred HHHHC--CCCCCCEEECHHHHH---HH----HHH---HHHHCCCHHH------------HCCCCCCCC------------
Q ss_conf 87402--567761010101322---78----999---9752010111------------102355766------------
Q gi|254780945|r 413 KLTQK--ATAPHVLLMTATPIP---RT----LVL---TSLGDIDISK------------ITEKPAGRK------------ 456 (700)
Q Consensus 413 ~L~~K--g~~ph~L~MtATPIP---RT----Lal---~~ygdldvS~------------i~e~P~gR~------------ 456 (700)
T Consensus 295 ~lve~La~~~~~lLLLTATP~QlG~e~~Fa~L~LLDPdrF~d~~~F~~e~~~y~~va~~v~~L~~~~~l~~~~~~~l~~~ 374 (955)
T PRK04914 295 QVVEQLAEVIPGVLLLTATPEQLGQESHFARLRLLDPDRFHDYEAFVEEEQQYRPVADAVQALLDGEKLSDDALNALGEL 374 (955)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 99999985159769984799889866689885277942115888899888755789999998631566888999999998
Q ss_pred -----------------------------------------------CCE--------EEEEE-----------------
Q ss_conf -----------------------------------------------620--------79997-----------------
Q gi|254780945|r 457 -----------------------------------------------PIK--------TVIIP----------------- 464 (700)
Q Consensus 457 -----------------------------------------------~I~--------T~~~~----------------- 464 (700)
T Consensus 375 l~e~~~~~l~~~~~~~~~~~~~~r~~li~~Lldr~gtgrvlfRntRa~v~gfp~R~l~~~~l~~~~~~~~~~~~~~~~~~ 454 (955)
T PRK04914 375 LGEQDIEPLLQAINSDSEDAQAARQELISELLDRHGTGRVLFRNTRAAVKGFPKRELHPYPLPLPEQYQTAIRKSLEARA 454 (955)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 64411447898752144456999999999998623215777765677743165545310567871567876543232467
Q ss_pred -----------------------CCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEECC
Q ss_conf -----------------------020026899997631038738999712012211121014666666686637103120
Q gi|254780945|r 465 -----------------------INRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAII 521 (700)
Q Consensus 465 -----------------------~~~~~~~~~~i~~~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~v~~l 521 (700)
T Consensus 455 ~~~l~~E~~~~~~~~~~~~~~~~D~rv~~Li~~Lk~~--~~eKvLVFte~~--------~Ta~~L~~~Lr~~~Gi~~avf 524 (955)
T PRK04914 455 RDMLYPEQIYQEFEGDNATWWNFDPRVEWLIDFLKSH--RSEKVLVICAKA--------ETALQLEQALREREGIRAAVF 524 (955)
T ss_pred HHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC--CCCCEEEEECCH--------HHHHHHHHHHHHHCCCCEEEE
T ss_conf 8751735666545655655421388999999999857--798589996838--------999999999987559956997
Q ss_pred CCCCCHHHHHHHHHHHHCCC--EEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCCCEE-EEEEECC
Q ss_conf 14699899999999975598--69999800341046888765899858525474688773011667898359-9997088
Q gi|254780945|r 522 HGRMSDIDKESVMDSFKNGT--CKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISS-CILLYHP 598 (700)
Q Consensus 522 HGkm~~~ek~~~m~~F~~g~--~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~~s~-c~l~~~~ 598 (700)
T Consensus 525 h~gms~~ERdraaa~Fa~~e~gaqVLI~TEagsEG~NLQF~~~LVnyDL-PWNP~rLEQRIGRlDRiGQ~~dV~Ihv--p 601 (955)
T PRK04914 525 HEGMSIIERDRAAAYFADEEDGAQVLLCSEIGSEGRNFQFASHLVLFDL-PFNPDLLEQRIGRLDRIGQKHDIQIHV--P 601 (955)
T ss_pred ECCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHEECCC-CCCHHHHHHHHHHHHHCCCCCCEEEEE--E
T ss_conf 0999989999999986176778519997252124503777435235258-987658899852065427867507986--2
Q ss_pred CCCHHHHHH--------HHHHHHHCHHH
Q ss_conf 899879999--------99998414258
Q gi|254780945|r 599 PLSKNSYTR--------LSVLKNTEDGF 618 (700)
Q Consensus 599 ~~~~~~~~R--------l~~l~~~~dGf 618 (700)
T Consensus 602 y~~~s~q~~l~~wy~~gl~af~~~~~~g 629 (955)
T PRK04914 602 YLEGTAQERLFRWYHEGLNAFEHTCPTG 629 (955)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 0289889999999998888975569118