HHsearch alignment for GI: 254780945 and conserved domain: PRK05159
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional.
Probab=93.05 E-value=0.83 Score=25.91 Aligned_cols=86 Identities=21% Similarity=0.272 Sum_probs=57.7
Q ss_pred CCCCHHHCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCC-----HHHHHHHCCCCCEEEEEEEEEE
Q ss_conf 44647888998789999999897542158983389999818936999995188-----7899873289888999989973
Q gi|254780945|r 57 YRPKISEISEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRK-----TEMLKNVFFEGRKITVTGKIKK 131 (700)
Q Consensus 57 ~~~~I~~l~~g~~vti~g~V~~~~~~~~~~r~~~~v~v~D~tg~i~lvfFn~~-----~~yl~k~lk~G~~v~vsGKv~~ 131 (700)
T Consensus 6 ~~~dl~~~~~g~~V~v~G~v~~~R~---~Gk-l~Fi~LrD~~g~iQ~~~~~~~~~~~~~~~~-~~l~~g~~v~v~G~v~~ 80 (434)
T PRK05159 6 YTSEVTPELDGKEVTLAGWVHEIRD---LGG-IKFLLLRDRTGIIQVVVPKKKVDEELFEGI-KKLSRESVVSVTGVVKE 80 (434)
T ss_pred CCCCCCHHHCCCEEEEEEEEEEEEC---CCC-CEEEEEEECCCCEEEEEECCCCCHHHHHHH-HCCCCCEEEEEEEEEEC
T ss_conf 3154994779999999898872881---798-599999969802899997998998999998-57999629999999985
Q ss_pred CC---CEEEEECCEEEECC
Q ss_conf 18---77999778689626
Q gi|254780945|r 132 LK---NRIIMVHPHYIFHN 147 (700)
Q Consensus 132 ~~---~~~qi~hPe~~~~~ 147 (700)
T Consensus 81 ~~~~~~~~ev~~~~i~ils 99 (434)
T PRK05159 81 SEKAPNGVEVQPEEIEVLN 99 (434)
T ss_pred CCCCCCCEEEEEEEEEEEE
T ss_conf 8999975899998999983