HHsearch alignment for GI: 254780945 and conserved domain: PRK06067
>PRK06067 flagellar accessory protein FlaH; Validated.
Probab=94.10 E-value=0.095 Score=33.31 Aligned_cols=57 Identities=12% Similarity=0.223 Sum_probs=39.8
Q ss_pred HHHHHHCCCCC--CEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHH
Q ss_conf 99984100134--30788621442236999999733444305458861279999999986
Q gi|254780945|r 283 DILQDMSQKNR--MLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEF 340 (700)
Q Consensus 283 eI~~Dl~~~~p--M~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~ 340 (700)
T Consensus 20 ~lD~~l~GG~p~g~~~li~G~~G~GKt~~~~~f~~~~~~~g~~~~~~~~-ee~~~~~~~~ 78 (241)
T PRK06067 20 EIDRKLGGGIPFGSLILIEGENDTGKSVLSQQFVWGALNQGKRGLAITT-ENTSKSYLKQ 78 (241)
T ss_pred HHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEE-CCCHHHHHHH
T ss_conf 5786506997799089998079988799999999999867982999994-2899999999