HHsearch alignment for GI: 254780945 and conserved domain: PRK06461

Probab=97.04  E-value=0.0081  Score=41.68  Aligned_cols=103  Identities=16%  Similarity=0.199  Sum_probs=70.9

Q ss_pred             CCCCHHHCCCC-CEEEEEEEEEEEEE---ECCCCC--CEEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEE-EEEE
Q ss_conf             44647888998-78999999989754---215898--33899998189369999951887899873289888999-9899
Q gi|254780945|r   57 YRPKISEISEE-RIVTITGYISQHSS---FQLQKR--RPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITV-TGKI  129 (700)
Q Consensus        57 ~~~~I~~l~~g-~~vti~g~V~~~~~---~~~~~r--~~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~v-sGKv  129 (700)
T Consensus         3 ~~~KI~dL~pg~~~V~v~~rVl~~~~~r~~~~~~g~~~V~~~~V~DeTG~I~~tlWde~---~-~~i~~GD~V~I~nayv   78 (130)
T PRK06461          3 DITKIKDLKPGMRRVNVTGRVLEVGEPKVIQTKGGPRTISEAVVGDETGRVKLTLWGDQ---A-GTLKEGEVVKIENAWT   78 (130)
T ss_pred             CEEEHHHCCCCCCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCEEEEEEECCC---C-CCCCCCCEEEEECCEE
T ss_conf             30589888899898269999997689727862899668999999879986999994564---5-6468999999944798


Q ss_pred             EECCCEEEEECCE---EEECCCC----CCCCCCCCCCCCCC
Q ss_conf             7318779997786---8962643----34444411000000
Q gi|254780945|r  130 KKLKNRIIMVHPH---YIFHNSQ----DVNFPLIEAVYSLP  163 (700)
Q Consensus       130 ~~~~~~~qi~hPe---~~~~~~~----~~~~~~I~PIYplt  163 (700)
T Consensus        79 ~~~~g~l~L~vGk~g~I~~~~d~~~p~~e~i~~~ep~~~~~  119 (130)
T PRK06461         79 TLYRGKVQLNVGRYGSISESDDEEVPEAEEIPEDEPEASYQ  119 (130)
T ss_pred             EEECCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             88888699986896268976874454245378667575456