HHsearch alignment for GI: 254780945 and conserved domain: PRK06826
>PRK06826 dnaE DNA polymerase III DnaE; Reviewed.
Probab=97.50 E-value=0.0072 Score=42.09 Aligned_cols=82 Identities=18% Similarity=0.229 Sum_probs=57.2
Q ss_pred HHHHHHCCCC--EECCCCCCCHHHH-HHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCC-
Q ss_conf 6668663710--3120146998999-99999975598699998003410468887658998585254746887730116-
Q gi|254780945|r 508 NSLHEHFTSS--IAIIHGRMSDIDK-ESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRV- 583 (700)
Q Consensus 508 ~~l~~~~~~~--v~~lHGkm~~~ek-~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRV- 583 (700)
T Consensus 769 AylK~hyP~ef~aa~l~~~~~~~~k~~~~~~e~~~~gi~vl------pPdIn~S~~~f~~~~~~Ir~gl~~Ikgvg~~~~ 842 (1157)
T PRK06826 769 AYLKRYYPVEFMAALLNSVMGNSDKVAFYIEECKRLGIEVL------PPDINESYSKFTVKGNKIRFGLAAVKNVGENAI 842 (1157)
T ss_pred HHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEE------CCEECCCCCCEEEECCEEEEHHHHHCCCCHHHH
T ss_conf 99986287999999865436895068999999998799597------973311388138879978875566268888899
Q ss_pred --------CCCCCCEEEEEE
Q ss_conf --------678983599997
Q gi|254780945|r 584 --------GRGEEISSCILL 595 (700)
Q Consensus 584 --------GRg~~~s~c~l~ 595 (700)
T Consensus 843 ~~I~~~R~~~G~f~s~~Df~ 862 (1157)
T PRK06826 843 DNIVKAREKKGKFTSLVDFC 862 (1157)
T ss_pred HHHHHHHHHCCCCCCHHHHH
T ss_conf 99999998779999989999