HHsearch alignment for GI: 254780945 and conserved domain: PRK07211

>PRK07211 replication factor A; Reviewed.
Probab=96.13  E-value=0.059  Score=34.89  Aligned_cols=107  Identities=12%  Similarity=0.178  Sum_probs=74.4

Q ss_pred             CCCHHHCCCCC-EEEEEEEEEEEEEEC-CCC-----CCEEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEE-EEEE
Q ss_conf             46478889987-899999998975421-589-----833899998189369999951887899873289888999-9899
Q gi|254780945|r   58 RPKISEISEER-IVTITGYISQHSSFQ-LQK-----RRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITV-TGKI  129 (700)
Q Consensus        58 ~~~I~~l~~g~-~vti~g~V~~~~~~~-~~~-----r~~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~v-sGKv  129 (700)
T Consensus       162 ~~~I~~l~~g~~dv~l~g~VL~~~~iRtF~R~DGSeGrV~sl~lGDETG~IRvTLWDd~aDl~-~~l~~GdsVeIv~ayv  240 (473)
T PRK07211        162 EYDADDLSLGQSDVTLRGEVLDTDAVRTFDRDDGSEGRVSNLTVGDETGRIRVTLWDDQADRA-DDLDAGASVEIVDGYV  240 (473)
T ss_pred             CCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCEEEEEEEECCCCEEEEEEECCCCCCC-CCCCCCCEEEEECCEE
T ss_conf             641122667887637999994378874114578986348888985587619999855874100-2589998799932586


Q ss_pred             EECCCEEEEECCEE---EECCCCCCCCCCCCCCCCCCHH
Q ss_conf             73187799977868---9626433444441100000000
Q gi|254780945|r  130 KKLKNRIIMVHPHY---IFHNSQDVNFPLIEAVYSLPTG  165 (700)
Q Consensus       130 ~~~~~~~qi~hPe~---~~~~~~~~~~~~I~PIYplt~G  165 (700)
T Consensus       241 REr~g~lEL~vgd~g~I~k~d~~Vey~peftpI~dI~~~  279 (473)
T PRK07211        241 REREGSLELHVGDRGAVDEVDEDVEFVPDTTPIDSVEID  279 (473)
T ss_pred             ECCCCCEEEEECCCCEEEECCCCCCCCCCCCCHHHCCCC
T ss_conf             224785678974631377556540025576527561358