HHsearch alignment for GI: 254780945 and conserved domain: PRK07217
>PRK07217 replication factor A; Reviewed.
Probab=94.26 E-value=0.53 Score=27.41 Aligned_cols=82 Identities=17% Similarity=0.179 Sum_probs=58.6
Q ss_pred CCCCCCCHHHC-CCCCEEEEEEEEEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEE-EEE
Q ss_conf 34444647888-9987899999998975421589833899998189369999951887899873289888999989-973
Q gi|254780945|r 54 DRHYRPKISEI-SEERIVTITGYISQHSSFQLQKRRPYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITVTGK-IKK 131 (700)
Q Consensus 54 Dr~~~~~I~~l-~~g~~vti~g~V~~~~~~~~~~r~~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~vsGK-v~~ 131 (700)
T Consensus 67 ~~~~~v~i~DI~~p~qWVtv~aKVVqLwe-p~s~sIaQ~GllgDeTG~IkFt~W~k--sd~-P~leeG~~Y~l~nvvvdE 142 (311)
T PRK07217 67 RGNELVNVADIDEPEQWVDVTAKVVQLWE-PSSESIAQVGLIGDETGTIKFTKWAK--SDL-PDLEEGKSYLLKNVVTDE 142 (311)
T ss_pred CCCCCEEHHHCCCCCCEEEEEEEEEEECC-CCCCCCEEEEEEECCCCEEEEEEECC--CCC-CCCCCCCEEEEEEEEEEE
T ss_conf 87773002220679954899999999507-89964311220004765078887336--898-644378579997888720
Q ss_pred CCCEEEEE
Q ss_conf 18779997
Q gi|254780945|r 132 LKNRIIMV 139 (700)
Q Consensus 132 ~~~~~qi~ 139 (700)
T Consensus 143 f~G~~sVk 150 (311)
T PRK07217 143 YQGRFSVK 150 (311)
T ss_pred CCCEEEEE
T ss_conf 28867788