HHsearch alignment for GI: 254780945 and conserved domain: PRK07952

Probab=95.95  E-value=0.038  Score=36.39  Aligned_cols=97  Identities=21%  Similarity=0.324  Sum_probs=64.4

Q ss_pred             CCCHHHHHHHHHHH---HHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCC
Q ss_conf             67988999999999---841001343078862144223699999973344430545886127999999998621101457
Q gi|254780945|r  272 SPTKSQESAIKDIL---QDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNT  348 (700)
Q Consensus       272 ~LT~~Q~~ai~eI~---~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~  348 (700)
T Consensus        73 ~~~~~q~~al~~a~~y~enf~~~~~-gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~t~~dLl~~-----lr~t~~~~  146 (242)
T PRK07952         73 VECEGQMNALSKARQYVEEFDGNIA-SFIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSA-----MKDTFRNS  146 (242)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH-----HHHHHHCC
T ss_conf             5877789999999999986543887-17997899997899999999999987994999779999999-----99998068


Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEECCCCCCCHHH
Q ss_conf             86589962464225667687762134754864111201334554444178852101335688
Q gi|254780945|r  349 QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQ  410 (700)
Q Consensus       349 ~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViDEQHRFGV~Q  410 (700)
T Consensus       147 ---------~~--~e-~~~l~~---------------------l~~~dLLIiDd---lG~e~  172 (242)
T PRK07952        147 ---------ET--SE-EQLLND---------------------LSNVDLLVIDE---IGVQT  172 (242)
T ss_pred             ---------CC--CH-HHHHHH---------------------HHCCCEEEEEC---CCCCC
T ss_conf             ---------75--69-999998---------------------63189898730---14665