HHsearch alignment for GI: 254780945 and conserved domain: PRK08402

>PRK08402 replication factor A; Reviewed.
Probab=93.81  E-value=0.49  Score=27.74  Aligned_cols=108  Identities=19%  Similarity=0.195  Sum_probs=68.6

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCC---EEEEEEEEEEEEEEC-CCC-----
Q ss_conf             67858899999887401246885548987870897401344446478889987---899999998975421-589-----
Q gi|254780945|r   16 FRGVGKKYSLFLSKIINCGNANETRFIDLLFYHPSSFIDRHYRPKISEISEER---IVTITGYISQHSSFQ-LQK-----   86 (700)
Q Consensus        16 LkGVGpk~a~~L~kl~~l~~~GI~ti~DLL~~~PrrYeDr~~~~~I~~l~~g~---~vti~g~V~~~~~~~-~~~-----   86 (700)
T Consensus        34 e~gISE~gAalllAe----eLGV~----L----~~~ee--e~~~kIkdI~~Gm~~rnVeivgrIi~ky~~REf~kkDGS~   99 (357)
T PRK08402         34 EDGISEHAAALLLAE----RLGVD----L----IKKEE--QSLMKISDLYPGMDPREVNIVGRILKKYPPREYTKKDGST   99 (357)
T ss_pred             HCCCCHHHHHHHHHH----HHCCC----C----CCCCC--CCCCCHHHHHCCCCCCCCEEEEEEEEECCCHHHHHCCCCC
T ss_conf             628776789999999----85886----5----55566--5640577750766756757999873305805530036987


Q ss_pred             CCEEEEEEECCCCEEEEEEECCCH-HHHHHHCCCCCEEEE-EEEEEEC-CCEEEE
Q ss_conf             833899998189369999951887-899873289888999-9899731-877999
Q gi|254780945|r   87 RRPYKILLNDGTGEITLLFFYRKT-EMLKNVFFEGRKITV-TGKIKKL-KNRIIM  138 (700)
Q Consensus        87 r~~~~v~v~D~tg~i~lvfFn~~~-~yl~k~lk~G~~v~v-sGKv~~~-~~~~qi  138 (700)
T Consensus       100 GkVASL~I~DeTG~aRLvLWD~~v~~yy-~~l~~GDVIKv~~~~Vres~~g~peL  153 (357)
T PRK08402        100 GRVASLIIYDDTGRARVVLWDAKVAEYY-NKLEVGDVIKVLDAQVRESLSGLPEL  153 (357)
T ss_pred             CEEEEEEEECCCCCEEEEEECHHHHHHH-HHCCCCCEEEEECHHHHHHCCCCHHE
T ss_conf             5378999973788389998338789889-75376866998331344311797120