HHsearch alignment for GI: 254780945 and conserved domain: PRK09751
>PRK09751 putative ATP-dependent helicase Lhr; Provisional.
Probab=99.68 E-value=4.1e-14 Score=130.24 Aligned_cols=278 Identities=22% Similarity=0.300 Sum_probs=192.7
Q ss_pred CCCCHHHHHHHHHHHHHH-------------HHCCEEEEEHHHHHHHHHHHHHHHHCC------------CCCCEEEEEE
Q ss_conf 442236999999733444-------------305458861279999999986211014------------5786589962
Q gi|254780945|r 302 VGSGKTLVALIAMAAAVE-------------AGGQAVIMAPIGILAQQHYEFIKKYTQ------------NTQIIVEIIT 356 (700)
Q Consensus 302 VGSGKTiVA~~A~l~~~~-------------~G~Q~alMaPTEILA~QH~~~~~~~~~------------~~~i~v~lLt 356 (700)
T Consensus 5 TGSGKTLAAFL~aLd~L~~~~~~~~~~~~~~~~~~VLYISPLKALa~Dv~rNL~~PL~gI~~~~~~~g~~~~~i~V~vRt 84 (1490)
T PRK09751 5 TGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETEVNLRVGIRT 84 (1490)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 87439899999999999961455555567889738999592788899999999879988899998625678997586379
Q ss_pred CCCCHHHHHHHHHHHCCCCCEEEEEC----HHHCCC--CCCCCCCCEEEECCCC-----CCCHHHHHHHHHC----CCCC
Q ss_conf 46422566768776213475486411----120133--4554444178852101-----3356889987402----5677
Q gi|254780945|r 357 GNMPQAHRRKALERIAHGQAHIIIGT----HALFQD--SIQYYKLILVIVDEQH-----RFGVQQRLKLTQK----ATAP 421 (700)
Q Consensus 357 g~~~~~er~~i~~~i~~G~~~iiIGT----HAL~q~--~v~F~~LgLvViDEQH-----RFGV~QR~~L~~K----g~~p 421 (700)
T Consensus 85 GDT~~~eR~r~~r----~PPdILITTPESL~LlLtsk~r~~L~~v~~VIVDEiHalagsKRGahLaLsLeRL~~l~~~~~ 160 (1490)
T PRK09751 85 GDTPAQERSKLTR----NPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSA 160 (1490)
T ss_pred CCCCHHHHHHHHH----CCCCEEEECHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999999850----899839848899999873569999779989996286442058839999999999998658999
Q ss_pred CCEEECHHHHHHHHHHHHHHC-CCHHHHCCCCCCCCCCEEEEEECCCH-----------------------HHHHHHHHH
Q ss_conf 610101013227899997520-10111102355766620799970200-----------------------268999976
Q gi|254780945|r 422 HVLLMTATPIPRTLVLTSLGD-IDISKITEKPAGRKPIKTVIIPINRI-----------------------DEVIERLKV 477 (700)
Q Consensus 422 h~L~MtATPIPRTLal~~ygd-ldvS~i~e~P~gR~~I~T~~~~~~~~-----------------------~~~~~~i~~ 477 (700)
T Consensus 161 qRIGLSATv~p~e~vA~fLgg~rpv~IV~-~~~~k~~~l~v~vPv~d~~~~~~~~~~~g~~~~~~~~~siw~~v~~~i~~ 239 (1490)
T PRK09751 161 QRIGLSATVRSASDVAAFLGGDRPVTVVN-PPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGILD 239 (1490)
T ss_pred CEEEEECCCCCHHHHHHHHCCCCCEEEEC-CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 68999776689999998737999837868-88888752799704665333332356776322355545316788999999
Q ss_pred HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCC------E--------------------------ECCCCCC
Q ss_conf 3103873899971201221112101466666668663710------3--------------------------1201469
Q gi|254780945|r 478 VLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTSS------I--------------------------AIIHGRM 525 (700)
Q Consensus 478 ~l~~g~q~y~VcPlIeese~~~~~~~~~~~~~l~~~~~~~------v--------------------------~~lHGkm 525 (700)
T Consensus 240 ~i~~hrsTLVF~N--------TR~~AErl~~~L~el~~erl~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ia~aHHGSl 311 (1490)
T PRK09751 240 EVLRHRSTIVFTN--------SRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGATSNRVQSSDVFIARSHHGSV 311 (1490)
T ss_pred HHHHCCCEEEEEC--------CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9972687699978--------87999999999999999873246432211000011122221123566543344555768
Q ss_pred CHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEECHHHCCHHHHHHHHHCCCCCCC----CEEEEEEE
Q ss_conf 989999999997559869999800341046888765899858525474688773011667898----35999970
Q gi|254780945|r 526 SDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEE----ISSCILLY 596 (700)
Q Consensus 526 ~~~ek~~~m~~F~~g~~~iLvaTtviEVGvdvpna~~mvI~~aerfGLsqLHQLRGRVGRg~~----~s~c~l~~ 596 (700)
T Consensus 312 Ske~R~~vE~~LK~G~LraVVaTSSLELGIDiG~VDlVVQvgsP~-sVAs~lQ---RvGRAGH~vg~~S~g~~~p 382 (1490)
T PRK09751 312 SKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPL-SVASGLQ---RIGRAGHQVGGVSKGLFFP 382 (1490)
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCEEEEECCCH-HHHHHHH---HHCCCCCCCCCCCCEEEEC
T ss_conf 999999999998679977899778054077644655799806966-7889999---7101257889844079962