HHsearch alignment for GI: 254780945 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=96.68  E-value=0.015  Score=39.66  Aligned_cols=84  Identities=17%  Similarity=0.193  Sum_probs=67.5

Q ss_pred             HHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCC
Q ss_conf             99733444305458861279999999986211014578658996246422566768776213475486411120133455
Q gi|254780945|r  312 IAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQ  391 (700)
Q Consensus       312 ~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~  391 (700)
T Consensus       236 L~~ll~~~~~~~~iIF~~tk~~a~~l~----~~L~~~g~~~~~lHg~~sq~~R~~~l~~F~~g~~~vLVaTD-vaaRGiD  310 (457)
T PRK10590        236 LSQMIGKGNWQQVLVFTRTKHGANHLA----EQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATD-IAARGLD  310 (457)
T ss_pred             HHHHHHHCCCCCEEEEECHHHHHHHHH----HHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECC-CCCCCCC
T ss_conf             999986158663358841199999999----99855699823232478999999999999869982999577-0115566


Q ss_pred             CCCCCEEEE
Q ss_conf             444417885
Q gi|254780945|r  392 YYKLILVIV  400 (700)
Q Consensus       392 F~~LgLvVi  400 (700)
T Consensus       311 i~~V~~VIn  319 (457)
T PRK10590        311 IEELPHVVN  319 (457)
T ss_pred             CCCCCEEEE
T ss_conf             356887999