HHsearch alignment for GI: 254780945 and conserved domain: PRK10590
>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=96.68 E-value=0.015 Score=39.66 Aligned_cols=84 Identities=17% Similarity=0.193 Sum_probs=67.5
Q ss_pred HHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCC
Q ss_conf 99733444305458861279999999986211014578658996246422566768776213475486411120133455
Q gi|254780945|r 312 IAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQ 391 (700)
Q Consensus 312 ~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~ 391 (700)
T Consensus 236 L~~ll~~~~~~~~iIF~~tk~~a~~l~----~~L~~~g~~~~~lHg~~sq~~R~~~l~~F~~g~~~vLVaTD-vaaRGiD 310 (457)
T PRK10590 236 LSQMIGKGNWQQVLVFTRTKHGANHLA----EQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATD-IAARGLD 310 (457)
T ss_pred HHHHHHHCCCCCEEEEECHHHHHHHHH----HHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECC-CCCCCCC
T ss_conf 999986158663358841199999999----99855699823232478999999999999869982999577-0115566
Q ss_pred CCCCCEEEE
Q ss_conf 444417885
Q gi|254780945|r 392 YYKLILVIV 400 (700)
Q Consensus 392 F~~LgLvVi 400 (700)
T Consensus 311 i~~V~~VIn 319 (457)
T PRK10590 311 IEELPHVVN 319 (457)
T ss_pred CCCCCEEEE
T ss_conf 356887999