HHsearch alignment for GI: 254780945 and conserved domain: PRK10919
>PRK10919 ATP-dependent DNA helicase Rep; Provisional.
Probab=91.94 E-value=0.54 Score=27.36 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=34.9
Q ss_pred HHCCHHHHHHHHHCCCCCCCCEEEEEEE------C--CCCC---HHHHHHHHHHHHHCHHHHHHHHHHHHCCCC--CCCC
Q ss_conf 2547468877301166789835999970------8--8899---879999999984142589999998520630--0026
Q gi|254780945|r 569 EHFGLAQLHQLRGRVGRGEEISSCILLY------H--PPLS---KNSYTRLSVLKNTEDGFLIAEEDLKQRKEG--EILG 635 (700)
Q Consensus 569 erfGLsqLHQLRGRVGRg~~~s~c~l~~------~--~~~~---~~~~~Rl~~l~~~~dGf~iAe~Dl~lRG~G--~~~G 635 (700)
T Consensus 550 ~~V~LmTiH~SKGL-----Ef~~Vfl~gl~eg~~P~~~~~~~~~~eEERRLfYV-----a~TRAk~~L~ls~~~~r~~~g 619 (672)
T PRK10919 550 DQVQLMTLHASKGL-----EFPYVYMVGMEEGFLPHQSSIDEDNIDEERRLAYV-----GITRAQKELTFTLCKERRQYG 619 (672)
T ss_pred CEEEEEEHHHHHCC-----CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHH-----HHHHHHHHHEEEECCHHHHCC
T ss_conf 90899648862310-----36879996783899987656998608799999999-----999987766550045234388
Q ss_pred CHHCCCCCCCCCCHHHHH
Q ss_conf 000698744000388759
Q gi|254780945|r 636 IKQSGMPKFLIAQPELHD 653 (700)
Q Consensus 636 ~~QsG~~~~~~~d~~~d~ 653 (700)
T Consensus 620 ~~~~~~pSrFl~eip~~~ 637 (672)
T PRK10919 620 ELVRPEPSRFLLELPQDD 637 (672)
T ss_pred CCCCCCCCCCHHHCCHHH
T ss_conf 775899994621378999