HHsearch alignment for GI: 254780945 and conserved domain: PRK12727

Probab=94.32  E-value=0.52  Score=27.50  Aligned_cols=223  Identities=15%  Similarity=0.159  Sum_probs=130.8

Q ss_pred             CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCE----------EEEEECCCCCHH-HHHHHHHHHHHHHHC-
Q ss_conf             78775789999863024679889999999998410013430----------788621442236-999999733444305-
Q gi|254780945|r  255 INVEGKIAQKILRNIPFSPTKSQESAIKDILQDMSQKNRML----------RILQGDVGSGKT-LVALIAMAAAVEAGG-  322 (700)
Q Consensus       255 ~~~~~~~~~~f~~~LPF~LT~~Q~~ai~eI~~Dl~~~~pM~----------RLLQGDVGSGKT-iVA~~A~l~~~~~G~-  322 (700)
T Consensus       302 ~GfS~~Lar~L~~~lP~~~~~~--~a~~~ll~~La~~Lpv~~~d~~~~gGv~AlvGpTGvGKTTT~aKlAa~~~~~~g~~  379 (557)
T PRK12727        302 YGFDAGLTRDVAMQIPADTELH--RGRGLMLGLLSKRLPVAPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPR  379 (557)
T ss_pred             CCCCHHHHHHHHHHCCCCCCHH--HHHHHHHHHHHHHCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             6699999999997483327888--99999999999628777775154076478743777673117999999999973998


Q ss_pred             CEEEEEHH--HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEE
Q ss_conf             45886127--9999999986211014578658996246422566768776213475486411120133455444417885
Q gi|254780945|r  323 QAVIMAPI--GILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIV  400 (700)
Q Consensus       323 Q~alMaPT--EILA~QH~~~~~~~~~~~~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvVi  400 (700)
T Consensus       380 ~valit~DtyRiga~eQL~~y~~i---lgvpv~~~~~~---~~l~~~l~~l~~~~-lvliDTaG~~~rd~~~--------  444 (557)
T PRK12727        380 DVALVTTDTQRVGGREQLHSYGRQ---LGIAVHEADSA---ESLLDLLERLRDYK-LVLIDTAGMGQRDRAL--------  444 (557)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHH---HCCEEEEECCH---HHHHHHHHHHCCCC-EEEEECCCCCCCCHHH--------
T ss_conf             189997266408799999999998---39757982899---99999999836999-8999499988469999--------


Q ss_pred             CCCCCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHH--HHHHHCCCHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf             210133568899874025677610101013227899--997520101111023557666207999702002689999763
Q gi|254780945|r  401 DEQHRFGVQQRLKLTQKATAPHVLLMTATPIPRTLV--LTSLGDIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVV  478 (700)
Q Consensus       401 DEQHRFGV~QR~~L~~Kg~~ph~L~MtATPIPRTLa--l~~ygdldvS~i~e~P~gR~~I~T~~~~~~~~~~~~~~i~~~  478 (700)
T Consensus       445 -------~~~~~~l~~~~~~~~~Lvl~a~~~~~~l~~~~~~~~~~~~~---------~~i~TKlDE~~~~G~~l~~~---  505 (557)
T PRK12727        445 -------AAQLNWLRAARQVTSLLVLPANAHFSDLDEVVRRFAHAKPQ---------GVVLTKLDETGRFGSALSVV---  505 (557)
T ss_pred             -------HHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCC---------EEEEEECCCCCCCCHHHHHH---
T ss_conf             -------99999875147763599996889989999999985379987---------48996143678703999999---


Q ss_pred             HCCCCEEEEEECCCCCCCCC---CCCHHHHHHHHHHHH
Q ss_conf             10387389997120122111---210146666666866
Q gi|254780945|r  479 LSEGKKAYWICPQIEEKKES---NFRSVVERFNSLHEH  513 (700)
Q Consensus       479 l~~g~q~y~VcPlIeese~~---~~~~~~~~~~~l~~~  513 (700)
T Consensus       506 ~~~~lp~~y~t~GQ~VPeDi~~a~~~~Lv~Ra~~L~~~  543 (557)
T PRK12727        506 VDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRA  543 (557)
T ss_pred             HHHCCCEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHH
T ss_conf             99689828975898285236438999999999997641