HHsearch alignment for GI: 254780945 and conserved domain: PRK12901
>PRK12901 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.71 E-value=3e-06 Score=68.54 Aligned_cols=96 Identities=29% Similarity=0.337 Sum_probs=73.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC-CHHHHHHHHHHHCCCCCEEE
Q ss_conf 14422369999997334443054588612799999999862110145786589962464-22566768776213475486
Q gi|254780945|r 301 DVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNTQIIVEIITGNM-PQAHRRKALERIAHGQAHII 379 (700)
Q Consensus 301 DVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i~v~lLtg~~-~~~er~~i~~~i~~G~~~ii 379 (700)
T Consensus 192 ~TGEGKTLvatlp~yLnAL~GkgVHvVTvNDYLA~RDaewmg~iy~fLGltvg~i~~~~~~~~~rr~aY~------~DIt 265 (1111)
T PRK12901 192 ATGEGKTLVATLPVFLNALTGNGVHVVTVNDYLAKRDSEWMGPLYMFHGLSVDCIDKHQPNSDARRKAYE------ADIT 265 (1111)
T ss_pred ECCCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHH------CCCE
T ss_conf 0688579999999999973699808983156778875998899999949865232699999799999873------7863
Q ss_pred EECHHHCC------------CCCCCCCCCEEEECC
Q ss_conf 41112013------------345544441788521
Q gi|254780945|r 380 IGTHALFQ------------DSIQYYKLILVIVDE 402 (700)
Q Consensus 380 IGTHAL~q------------~~v~F~~LgLvViDE 402 (700)
T Consensus 266 YgTn~EfGFDYLRDnm~~~~~~~vqr~~~~aIVDE 300 (1111)
T PRK12901 266 YGTNNEFGFDYLRDNMAVSPKDLVQRKHNYAIVDE 300 (1111)
T ss_pred ECCCCCCCHHHHHHHCCCCHHHHCCCCCCEEEEEC
T ss_conf 41565410243564015787872567776588842