HHsearch alignment for GI: 254780945 and conserved domain: PRK13480

>PRK13480 3'-5' exoribonuclease YhaM; Provisional.
Probab=98.25  E-value=3.8e-05  Score=59.98  Aligned_cols=88  Identities=14%  Similarity=0.177  Sum_probs=71.6

Q ss_pred             CCHHHCCCCCEEEEEEEEEEEEEECCCCCCE-EEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCEEE
Q ss_conf             6478889987899999998975421589833-899998189369999951887899873289888999989973187799
Q gi|254780945|r   59 PKISEISEERIVTITGYISQHSSFQLQKRRP-YKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITVTGKIKKLKNRII  137 (700)
Q Consensus        59 ~~I~~l~~g~~vti~g~V~~~~~~~~~~r~~-~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~vsGKv~~~~~~~q  137 (700)
T Consensus         3 ~~i~~l~~G~~v~~~~lv~~~~~~~tknG~~Yl~l~L~D~tG~I~ak~W~~~-~~~~~~~~~g~~V~v~G~v~~y~g~~Q   81 (314)
T PRK13480          3 KGIENLEVGESVDHFLLIKSATKGVASNGKPFLTLILQDKSGDIEAKLWDVS-KEDEATYVPETIVHVKGDIINYRGRKQ   81 (314)
T ss_pred             CCHHHCCCCCEEEEEEEEEECHHHCCCCCCCEEEEEEECCCCEEEEEECCCC-HHHHHHCCCCCEEEEEEEEEEECCCCC
T ss_conf             5141089998888999998714331899981479999837876889967898-666863789988999999987689862


Q ss_pred             EECCEEEECC
Q ss_conf             9778689626
Q gi|254780945|r  138 MVHPHYIFHN  147 (700)
Q Consensus       138 i~hPe~~~~~  147 (700)
T Consensus        82 l~i~~i~~~~   91 (314)
T PRK13480         82 LKVNQIRLAT   91 (314)
T ss_pred             EEEEEEEECC
T ss_conf             5888857678