HHsearch alignment for GI: 254780945 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=95.44 E-value=0.14 Score=31.97 Aligned_cols=87 Identities=11% Similarity=0.178 Sum_probs=72.9
Q ss_pred HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCC--CCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCC
Q ss_conf 973344430545886127999999998621101457--865899624642256676877621347548641112013345
Q gi|254780945|r 313 AMAAAVEAGGQAVIMAPIGILAQQHYEFIKKYTQNT--QIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSI 390 (700)
Q Consensus 313 A~l~~~~~G~Q~alMaPTEILA~QH~~~~~~~~~~~--~i~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v 390 (700)
T Consensus 276 ~l~~~i~~~~~tLvF~NtR~~aE~~~~~L~~~~~~~~~~~~i~~HHgSls~e~R~~vE~~lk~G~l~~vV~TsSL-ELGI 354 (878)
T PRK13767 276 TLDELIQEHRTTLIFTNTRSGAERVVYKLRKRYPEEYDEDNIGAHHSSLSREVRLEVEEKLKRGELKVVVSSTSL-ELGI 354 (878)
T ss_pred HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECHH-HCCC
T ss_conf 999999838977999155899999999999853430675432220177899999999999857998689982736-5077
Q ss_pred CCCCCCEEEE
Q ss_conf 5444417885
Q gi|254780945|r 391 QYYKLILVIV 400 (700)
Q Consensus 391 ~F~~LgLvVi 400 (700)
T Consensus 355 DiG~Vd~Viq 364 (878)
T PRK13767 355 DIGYIDLVVL 364 (878)
T ss_pred CCCCCCEEEE
T ss_conf 7775258997