HHsearch alignment for GI: 254780945 and conserved domain: TIGR02237

>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.

Probab=92.11  E-value=0.16  Score=31.44  Aligned_cols=47  Identities=30%  Similarity=0.379  Sum_probs=37.6

Q ss_pred             EEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHH-HHHHHHHHHHHHCCCC
Q ss_conf             86214422369999997334443054588612799-9999998621101457
Q gi|254780945|r  298 LQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGI-LAQQHYEFIKKYTQNT  348 (700)
Q Consensus       298 LQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEI-LA~QH~~~~~~~~~~~  348 (700)
T Consensus        17 iYGp~G~GKTn~c~~~a~~a~~~Gk~v~YiD-TEGGLS---~ER~~q~~~~~   64 (223)
T TIGR02237        17 IYGPPGSGKTNICLILAVNAARQGKKVVYID-TEGGLS---PERFKQIAEDR   64 (223)
T ss_pred             EECCCCCCHHHHHHHHHHHHHHCCCCEEEEE-CCCCCH---HHHHHHHHHCC
T ss_conf             8758998678999999999986189589996-289832---89999986305