HHsearch alignment for GI: 254780945 and conserved domain: TIGR03015

>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=94.80  E-value=0.081  Score=33.83  Aligned_cols=177  Identities=18%  Similarity=0.237  Sum_probs=95.5

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH-HHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             67988999999999841001343078862144223699999973344-43054588612799999999862110145786
Q gi|254780945|r  272 SPTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV-EAGGQAVIMAPIGILAQQHYEFIKKYTQNTQI  350 (700)
Q Consensus       272 ~LT~~Q~~ai~eI~~Dl~~~~pM~RLLQGDVGSGKTiVA~~A~l~~~-~~G~Q~alMaPTEILA~QH~~~~~~~~~~~~i  350 (700)
T Consensus        23 y~s~~h~~al~~L~~~l~~~~g~~-lltGe~GtGKTtl-lr~l~~~l~~~~~~~~~i~~~~l~~~~l---l~~i~~~lg~   97 (269)
T TIGR03015        23 YPSKGHKRAMAYLEYGLSQREGFI-LITGEVGAGKTTL-IRNLLKRLDQERVVAAKLVNTRVDAEDL---LRMVAADFGL   97 (269)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEE-EEECCCCCCHHHH-HHHHHHHCCCCCEEEEEECCCCCCHHHH---HHHHHHHCCC
T ss_conf             478669999999999996489659-9972998988999-9999984593454899976999999999---9999998598


Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHC------CCCCCCE
Q ss_conf             5899624642256676877621347548641112013345544441788521013356889987402------5677610
Q gi|254780945|r  351 IVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVIVDEQHRFGVQQRLKLTQK------ATAPHVL  424 (700)
Q Consensus       351 ~v~lLtg~~~~~er~~i~~~i~~G~~~iiIGTHAL~q~~v~F~~LgLvViDEQHRFGV~QR~~L~~K------g~~ph~L  424 (700)
T Consensus        98 ~~~---~~----~~~~~~~~l~~~----L---~~~~~~g----~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~~~ll~i  159 (269)
T TIGR03015        98 ETE---GR----DKAALLRELEDF----L---IEQFAAG----KRALLVVDEAQNLTPELLEELRMLSNFQTDNAKLLQI  159 (269)
T ss_pred             CCC---CC----CHHHHHHHHHHH----H---HHHHHCC----CCEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf             988---98----999999999999----9---9999669----9469997242219999999999997013588870489


Q ss_pred             EECHHH-HHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEE-EECCCHHHHHHHHHHHHCCC
Q ss_conf             101013-22789999752010111102355766620799-97020026899997631038
Q gi|254780945|r  425 LMTATP-IPRTLVLTSLGDIDISKITEKPAGRKPIKTVI-IPINRIDEVIERLKVVLSEG  482 (700)
Q Consensus       425 ~MtATP-IPRTLal~~ygdldvS~i~e~P~gR~~I~T~~-~~~~~~~~~~~~i~~~l~~g  482 (700)
T Consensus       160 iL~GqpeL~~~L~~~~-----------~~~l~qRI~~~~~L~pl~~eet~~YI~~RL~~A  208 (269)
T TIGR03015       160 FLVGQPEFRETLQSPQ-----------LQQLRQRIIASCHLGPLDREETREYIEHRLERA  208 (269)
T ss_pred             EEECCHHHHHHHCCCC-----------HHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf             9957867999872740-----------254555076799847999899999999999866