HHsearch alignment for GI: 254780945 and conserved domain: cd01120
>cd01120 RecA-like_NTPases RecA-like NTPases. This family includes the NTP binding domain of F1 and V1 H+ATPases, DnaB and related helicases as well as bacterial RecA and related eukaryotic and archaeal recombinases. This group also includes bacterial conjugation proteins and related DNA transfer proteins involved in type II and type IV secretion.
Probab=91.74 E-value=0.72 Score=26.41 Aligned_cols=46 Identities=26% Similarity=0.268 Sum_probs=35.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHH
Q ss_conf 78862144223699999973344430545886127999999998621
Q gi|254780945|r 296 RILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYEFIK 342 (700)
Q Consensus 296 RLLQGDVGSGKTiVA~~A~l~~~~~G~Q~alMaPTEILA~QH~~~~~ 342 (700)
T Consensus 2 ~li~g~~g~GKttl~~~~~~~~~~~~~~~~~~~~-ee~~~q~~~~~~ 47 (165)
T cd01120 2 ILVFGPTGSGKTTLALQLALNIATKGGKVVYVDI-EEEIEELTERLI 47 (165)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEC-CCCHHHHHHHHH
T ss_conf 8999899998999999999998763997999986-664489999999