HHsearch alignment for GI: 254780945 and conserved domain: cd04492

>cd04492 YhaM_OBF_like YhaM_OBF_like: A subfamily of OB folds similar to that found in Bacillus subtilis YhaM and Staphylococcus aureus cmp-binding factor-1 (SaCBF1). Both these proteins are 3'-to-5'exoribonucleases. YhaM requires Mn2+ or Co2+ for activity and is inactive in the presence of Mg2+. YhaM also has a Mn2+ dependent 3'-to-5'single-stranded DNA exonuclease activity. SaCBF is also a double-stranded DNA binding protein, binding specifically to cmp, the replication enhancer found in S. aureus plasmid pT181. Proteins in this group combine an N-terminal OB fold with a C-terminal HD domain. The HD domain is found in metal-dependent phosphohydrolases.
Probab=97.08  E-value=0.0069  Score=42.21  Aligned_cols=70  Identities=17%  Similarity=0.252  Sum_probs=54.0

Q ss_pred             EEEEECCCCCC-EEEEEEECCCCEEEEEEECCCHHHHHHHCCCCCEEEEEEEEEECCCEEEEECCEEEECCC
Q ss_conf             97542158983-389999818936999995188789987328988899998997318779997786896264
Q gi|254780945|r   78 QHSSFQLQKRR-PYKILLNDGTGEITLLFFYRKTEMLKNVFFEGRKITVTGKIKKLKNRIIMVHPHYIFHNS  148 (700)
Q Consensus        78 ~~~~~~~~~r~-~~~v~v~D~tg~i~lvfFn~~~~yl~k~lk~G~~v~vsGKv~~~~~~~qi~hPe~~~~~~  148 (700)
T Consensus         8 ~~~~~~tk~G~~Yl~l~L~D~tG~I~ak~W~~~-~~~~~~~~~g~~V~v~G~v~~y~g~~Ql~I~~i~~~~~   78 (83)
T cd04492           8 SKELRTAKNGKPYLALTLQDKTGEIEAKLWDAS-EEDEEKFKPGDIVHVKGRVEEYRGRLQLKIQRIRLVTE   78 (83)
T ss_pred             EHHHHCCCCCCCEEEEEEECCCCEEEEEECCCC-HHHHHCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCC
T ss_conf             801000579991789999878876888885788-67883078999999999998889951089989689983