HHsearch alignment for GI: 254780945 and conserved domain: pfam00580

>pfam00580 UvrD-helicase UvrD/REP helicase. The Rep family helicases are composed of four structural domains. The Rep family function as dimers. REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA. Bacillus subtilis addA and Escherichia coli exodeoxyribonuclease V beta have large insertions near to the carboxy-terminus relative to other members of the family.
Probab=94.62  E-value=0.1  Score=33.03  Aligned_cols=21  Identities=24%  Similarity=0.167  Sum_probs=14.5

Q ss_pred             CCEEEECCCCCCCHHHHHHHH
Q ss_conf             417885210133568899874
Q gi|254780945|r  395 LILVIVDEQHRFGVQQRLKLT  415 (700)
Q Consensus       395 LgLvViDEQHRFGV~QR~~L~  415 (700)
T Consensus       213 ~~~ilVDEfQDtn~~Q~~il~  233 (494)
T pfam00580       213 FKYILVDEFQDTNPIQYELLK  233 (494)
T ss_pred             CCEEECHHHCCCHHHHHHHHH
T ss_conf             726540343026499999999