RPSBLAST alignment for GI: 254780945 and conserved domain: pfam00270
>gnl|CDD|144015 pfam00270, DEAD, DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression. Length = 167
Score = 116 bits (293), Expect = 2e-26
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 274 TKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAV---EAGGQAVIMAPI 330
T Q AI IL+ ++Q GSGKTL L+ A+ G QA+++AP
Sbjct: 1 TPIQAEAIPAILEGKD------VLVQAPTGSGKTLAFLLPALQALLKNPDGPQALVLAPT 54
Query: 331 GILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSI 390
LA+Q YE +KK + + V ++ G + + L++ I++GT D +
Sbjct: 55 RELAEQIYEELKKLGKYLGLKVALLYGGDSPKEQLRKLKK----GPDILVGTPGRLLDLL 110
Query: 391 QYYKLIL-----VIVDEQHR-----FGVQQRLKLTQKATAPHVLLMTATPI 431
+ L+L +++DE HR FG L + +LL++AT
Sbjct: 111 ERGGLLLKNLKLLVLDEAHRLLDQGFGDDLEEILRRLPPKRQILLLSATLP 161