RPSBLAST alignment for GI: 254780945 and conserved domain: TIGR00643

 Score =  603 bits (1558), Expect = e-173
 Identities = 264/628 (42%), Positives = 385/628 (61%), Gaps = 12/628 (1%)

Query: 43  DLLFYHPSSFIDRHYRPKISEISEERIVTITGYISQHSSFQLQKRRPYKILLND-GTGEI 101
           DLLFY P  + DR     I E+      TI G +  H  F  ++R+  K+ L D G  ++
Sbjct: 8   DLLFYFPRRYEDRTLLQTIGELLPGERATIVGEVLSHCIFGFKRRKVLKLRLKDGGYKKL 67

Query: 102 TLLFFYRKTEMLKNVFFEGRKITVTGKIKKLKNRIIMVHPHYIFHNSQDVNFPLIEAVYS 161
            L FF R    LK  F  G K+ V GK+K  K +  ++HP +I           I  VY 
Sbjct: 68  ELRFFNR--AFLKKKFKVGSKVVVYGKVKSSKFKAYLIHPEFISEKDGVEFELKILPVYP 125

Query: 162 LPTGLSVDLFKKIIVEALSRLP-VLPEWIEKDLLQKKSFPSIAEAFNIIHNPRKAKDFEW 220
           L  GL+    +K+I +AL +L   L + + ++L +K    S+ +A   IH P   K    
Sbjct: 126 LTEGLTQKKLRKLIQQALDQLDKSLEDPLPEELREKYGLLSLEDALRAIHFP---KTLSL 182

Query: 221 TSPARERLAYDELLAGQIALL-LMRKQFKKEIGIPINVEGKIAQKILRNIPFSPTKSQES 279
              AR RL +DE    Q+A+L     + ++    P N   ++  K L ++PF  T++Q+ 
Sbjct: 183 LELARRRLIFDEFFYLQLAMLARRLGEKQQFSAPPANPSEELLTKFLASLPFKLTRAQKR 242

Query: 280 AIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGILAQQHYE 339
            +K+ILQD+     M R+LQGDVGSGKTLVA +AM AA+EAG Q  +MAP  ILA+QHY 
Sbjct: 243 VVKEILQDLKSDVPMNRLLQGDVGSGKTLVAALAMLAAIEAGYQVALMAPTEILAEQHYN 302

Query: 340 FIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQYYKLILVI 399
            ++       I V ++TG++    R++ LE IA GQ H+++GTHAL Q+ +++ +L LVI
Sbjct: 303 SLRNLLAPLGIEVALLTGSLKGKRRKELLETIASGQIHLVVGTHALIQEKVEFKRLALVI 362

Query: 400 VDEQHRFGVQQRLKLTQKA---TAPHVLLMTATPIPRTLVLTSLGDIDISKITEKPAGRK 456
           +DEQHRFGV+QR KL +K      PHVL+M+ATPIPRTL LT  GD+D S I E P GRK
Sbjct: 363 IDEQHRFGVEQRKKLREKGQGGFTPHVLVMSATPIPRTLALTVYGDLDTSIIDELPPGRK 422

Query: 457 PIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKESNFRSVVERFNSLHEHFTS 516
           PI TV+I  +  D V E ++  +++G++AY + P IEE ++ + ++    +  L + F  
Sbjct: 423 PITTVLIKHDEKDIVYEFIEEEIAKGRQAYVVYPLIEESEKLDLKAAEALYERLKKAFPK 482

Query: 517 -SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQ 575
            ++ ++HGRM   +KE+VM+ F+ G   +L+ATTVIEVG+DV +A++++IE+AE FGL+Q
Sbjct: 483 YNVGLLHGRMKSDEKEAVMEEFREGEVDILVATTVIEVGVDVPNATVMVIEDAERFGLSQ 542

Query: 576 LHQLRGRVGRGEEISSCILLYHPPLSKNSYTRLSVLKNTEDGFLIAEEDLKQRKEGEILG 635
           LHQLRGRVGRG+  S C+L+Y  P S+++  RL V+ +T DGF+IAEEDL+ R  G++LG
Sbjct: 543 LHQLRGRVGRGDHQSYCLLVYKNPKSESAKKRLRVMADTLDGFVIAEEDLELRGPGDLLG 602

Query: 636 IKQSGMPKFLIAQPELHDSLLEIARKDA 663
            KQSG P+F +A       +L  AR+DA
Sbjct: 603 TKQSGYPEFRVADLVRDREILVEAREDA 630