RPSBLAST alignment for GI: 254780945 and conserved domain: PLN00206
>gnl|CDD|177796 PLN00206, PLN00206, DEAD-box ATP-dependent RNA helicase; Provisional. Length = 518
Score = 42.9 bits (101), Expect = 3e-04
Identities = 99/421 (23%), Positives = 168/421 (39%), Gaps = 105/421 (24%)
Query: 234 LAGQIALLLMRKQFKKEIGIPINVEG-------------KIAQKILRNIPFS----PTKS 276
L+ A LL RK + I+V+G + K+L N+ + PT
Sbjct: 95 LSSSQAELLRRK-------LEIHVKGEAVPPPILSFSSCGLPPKLLLNLETAGYEFPTPI 147
Query: 277 QESAIKDILQDMSQKNRMLRILQGDVGSGKT---LVALIAMAAAVEAGGQ-------AVI 326
Q AI L R L ++ D GSGKT LV +I+ + +G A++
Sbjct: 148 QMQAIPAAL-----SGRSL-LVSADTGSGKTASFLVPIISRCCTIRSGHPSEQRNPLAMV 201
Query: 327 MAPIGILAQQHYEFIKKYTQNTQIIVEIITGN--MPQAHRRKALERIAHGQAHIIIGTHA 384
+ P L Q + K + ++ G MPQ L RI G +I+GT
Sbjct: 202 LTPTRELCVQVEDQAKVLGKGLPFKTALVVGGDAMPQQ-----LYRIQQG-VELIVGTPG 255
Query: 385 -----LFQDSIQYYKLILVIVDE-----QHRFGVQQRLKLTQKATAPHVLLMTATPIPRT 434
L + I+ + ++++DE + F Q +++ Q + P VLL +AT
Sbjct: 256 RLIDLLSKHDIELDNVSVLVLDEVDCMLERGFR-DQVMQIFQALSQPQVLLFSAT----- 309
Query: 435 LVLTSLGDIDISKITEKPAG---RKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQ 491
+S EK A + I I NR ++ +++L A W+ +
Sbjct: 310 ----------VSPEVEKFASSLAKDIILISIGNPNRPNKAVKQL---------AIWVETK 350
Query: 492 IEEKK-------ESNFRS-VVERFNS------LHEHFTSSIAI----IHGRMSDIDKESV 533
+++K + +F+ V +S L T + IHG S ++ V
Sbjct: 351 QKKQKLFDILKSKQHFKPPAVVFVSSRLGADLLANAITVVTGLKALSIHGEKSMKERREV 410
Query: 534 MDSFKNGTCKLLIATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGRGEEISSCI 593
M SF G +++AT V+ G+D++ +II + + +HQ+ GR R E + I
Sbjct: 411 MKSFLVGEVPVIVATGVLGRGVDLLRVRQVIIFDMPNTIKEYIHQI-GRASRMGEKGTAI 469
Query: 594 L 594
+
Sbjct: 470 V 470