RPSBLAST alignment for GI: 254780945 and conserved domain: COG4098

>gnl|CDD|33855 COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]. Length = 441

 Score = 68.4 bits (167), Expect = 6e-12
 Identities = 77/347 (22%), Positives = 153/347 (44%), Gaps = 43/347 (12%)

Query: 274 TKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGIL 333
           +  Q+ A   ++Q + QK   L  +    G+GKT +    +  A+  GG+  I +P   +
Sbjct: 99  SPGQKKASNQLVQYIKQKEDTL--VWAVTGAGKTEMIFQGIEQALNQGGRVCIASPRVDV 156

Query: 334 AQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGT-HALFQDSIQY 392
             + Y  +K+   N  I  +++ G+              + +A +++ T H L +    +
Sbjct: 157 CLELYPRLKQAFSNCDI--DLLYGDSDS-----------YFRAPLVVATTHQLLR----F 199

Query: 393 YKLI-LVIVDEQHRF------GVQQRLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDI 445
            +   L+I+DE   F       +Q  +K  +K      + +TATP  +       G++ I
Sbjct: 200 KQAFDLLIIDEVDAFPFSDDQSLQYAVKKARKKEGA-TIYLTATPTKKLERKILKGNLRI 258

Query: 446 SKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKE-----SNF 500
            K+  +  G+       + I   ++ ++R K+ L   K   W+  Q +  +         
Sbjct: 259 LKLPARFHGKPLPVPKFVWIGNWNKKLQRNKLPL---KLKRWLEKQRKTGRPVLIFFPEI 315

Query: 501 RSVVERFNSLHEHFTS-SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDVVD 559
            ++ +   +L +     +IA +H    D  ++  +++F++G   LLI TT++E G+   +
Sbjct: 316 ETMEQVAAALKKKLPKETIASVHS--EDQHRKEKVEAFRDGKITLLITTTILERGVTFPN 373

Query: 560 ASIIIIENAEH--FGLAQLHQLRGRVGRG-EEISSCILLYHPPLSKN 603
             + ++  AEH  F  + L Q+ GRVGR  E  +  +L +H   SK 
Sbjct: 374 VDVFVL-GAEHRVFTESALVQIAGRVGRSLERPTGDVLFFHYGKSKA 419