RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0326
>gnl|CDD|35547 KOG0326, KOG0326, KOG0326, ATP-dependent RNA helicase [RNA processing and modification]. Length = 459
Score = 42.3 bits (99), Expect = 4e-04
Identities = 68/332 (20%), Positives = 138/332 (41%), Gaps = 43/332 (12%)
Query: 273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGGQAVIMAPIGI 332
P+ QE +I L + ++ + R G + + ++ + QA+I+ P
Sbjct: 108 PSPIQEESIPIAL---TGRDILARAKNGTGKTAAYCIPVLEKIDPKKNVIQAIILVPTRE 164
Query: 333 LAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDSIQ- 391
LA Q + K+ +++ I V + TG R + R+ + H+++GT D +
Sbjct: 165 LALQTSQVCKELSKHLGIKVMVTTGG---TSLRDDIMRL-NQTVHLVVGTPGRILDLAKK 220
Query: 392 ----YYKLILVIVDEQHRFGVQQRLKLTQKATAPHVLLMTATPIPRTLVLTSLGDIDISK 447
+++++DE + L + + ++ P R ++L S K
Sbjct: 221 GVADLSDCVILVMDEADKL-----LSVDFQPIVEKLISFL--PKERQILLYSATFPLTVK 273
Query: 448 ITEKPAGRKPIKTVIIPINRIDEV----IERLKVVLSEGKKAYWICP---QIEEKKESNF 500
+KP + IN ++E+ + + + E +K + + +++ + F
Sbjct: 274 GFMDRHLKKPYE-----INLMEELTLKGVTQYYAFVEERQKVHCLNTLFSKLQINQSIIF 328
Query: 501 RSVVERFNSLHEHFTS---SIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDV 557
+ R L + T S IH +M+ + V F+NG C+ L+ T + GID+
Sbjct: 329 CNSTNRVELLAKKITELGYSCYYIHAKMAQEHRNRVFHDFRNGKCRNLVCTDLFTRGIDI 388
Query: 558 VDASIII----IENAEHFGLAQLHQLRGRVGR 585
+++I +NAE + LH++ GR GR
Sbjct: 389 QAVNVVINFDFPKNAETY----LHRI-GRSGR 415