RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0327

>gnl|CDD|35548 KOG0327, KOG0327, KOG0327, Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases [Translation, ribosomal structure and biogenesis]. Length = 397

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 69/332 (20%), Positives = 139/332 (41%), Gaps = 40/332 (12%)

Query: 273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVE---AGGQAVIMAP 329
           P+  Q+ AI   +     K   +   Q   G+GKT   LI++   ++      QA+I+AP
Sbjct: 49  PSAIQQRAILPCI-----KGHDVIA-QAQSGTGKTAAFLISILQQIDMSVKETQALILAP 102

Query: 330 IGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQDS 389
              LAQQ  + ++    +  + V    G        +AL +      HI++GT     D 
Sbjct: 103 TRELAQQIQKVVRALGDHMDVSVHACIGGTNVRREDQALLKDK---PHIVVGTPGRVFDM 159

Query: 390 IQYYKL--------ILVIVDEQHRFGVQQRLKLTQKATAPHVLLMTATPIPRTLVLTSLG 441
           +    L        +L   DE    G + ++    +     V         + ++L++  
Sbjct: 160 LNRGSLSTDGIKMFVLDEADEMLSRGFKDQIYDIFQELPSDV---------QVVLLSATM 210

Query: 442 DIDISKITEKPAGRKPIKTVIIPINRIDEVIERLKVVLSEGKKAYWICPQIEEKKES--- 498
             D+ ++T+K   R+P++ ++       E I++  + + + +K   +C       ++   
Sbjct: 211 PSDVLEVTKK-FMREPVRILVKKDELTLEGIKQFYINVEKEEKLDTLCDLYRRVTQAVIF 269

Query: 499 -NFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLLIATTVIEVGIDV 557
            N R  V+           +++ IHG M   +++++M  F++G+ ++LI T ++  GIDV
Sbjct: 270 CNTRRKVDNLTDKLRAHGFTVSAIHGDMEQNERDTLMREFRSGSSRVLITTDLLARGIDV 329

Query: 558 VDASIIII----ENAEHFGLAQLHQLRGRVGR 585
              S+++        E++         GR GR
Sbjct: 330 QQVSLVVNYDLPARKENYIHRIGRA--GRFGR 359