RPSBLAST alignment for GI: 254780945 and conserved domain: KOG0328
>gnl|CDD|35549 KOG0328, KOG0328, KOG0328, Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily [Translation, ribosomal structure and biogenesis]. Length = 400
Score = 58.4 bits (141), Expect = 7e-09
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 57/340 (16%)
Query: 273 PTKSQESAIKDILQDMSQKNRMLRILQGDVGSGKTLVALIAMAAAVEAGG---QAVIMAP 329
P+ Q+ AI IL+ I Q G+GKT I++ +++ QA+I++P
Sbjct: 50 PSAIQQRAIPQILKGRDV------IAQAQSGTGKTATFSISVLQSLDISVRETQALILSP 103
Query: 330 IGILAQQHYEFIKKYTQNTQIIVEIITGNMPQAHRRKALERIAHGQAHIIIGTHALFQD- 388
LA Q + I + G K L+ +GQ H++ GT D
Sbjct: 104 TRELAVQIQKVILALGDYMNVQCHACIGGKNLGEDIKKLD---YGQ-HVVSGTPGRVLDM 159
Query: 389 ----SIQYYKLILVIVDEQHRF---GVQQRLKLTQKATAP--HVLLMTATPIPRTLVLTS 439
S++ + ++++DE G ++++ + P V+L++AT L +T
Sbjct: 160 IKRRSLRTRAVKMLVLDEADEMLNKGFKEQIYDIYRYLPPGAQVVLVSATLPHEILEMTE 219
Query: 440 LGDIDISKITEKPAGR--KPIKTVIIPINRIDEVIERLK------------VVLSEGKKA 485
D +I K + IK + + + + + L + + +K
Sbjct: 220 KFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKV 279
Query: 486 YWICPQIEEKKESNFRSVVERFNSLHEHFTSSIAIIHGRMSDIDKESVMDSFKNGTCKLL 545
W+ E+ +E+NF +++ +HG M +++ +M+ F++G ++L
Sbjct: 280 DWLT---EKMREANF----------------TVSSMHGDMEQKERDKIMNDFRSGKSRVL 320
Query: 546 IATTVIEVGIDVVDASIIIIENAEHFGLAQLHQLRGRVGR 585
I T V GIDV S++I + + +H++ GR GR
Sbjct: 321 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRI-GRSGR 359